PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
2201-2250 / 86044 show all
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
96.4762
96.4847
96.4677
49.2144
3870141396014574
51.0345
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
95.7166
95.9906
95.4442
52.1613
2442102251412052
43.3333
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
97.8522
97.4079
98.3005
42.9181
14283814462522
88.0000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
96.9502
97.0480
96.8526
49.3747
23677224317939
49.3671
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
96.2004
96.2658
96.1350
51.4737
15215915676325
39.6825
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
98.3912
98.6014
98.1818
44.9656
846128641614
87.5000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
68.6189
80.5430
59.7701
87.2900
1784320814052
37.1429
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
64.1521
78.2895
54.3396
87.4882
1193314412138
31.4050
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
81.0909
85.5072
77.1084
86.6129
5910641914
73.6842
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
76.6177
84.7222
69.9283
81.0889
10981981365587286
48.7223
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
73.2802
81.7861
66.3768
81.5483
696155916464182
39.2241
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
83.9922
90.3153
78.4965
79.8804
40143449123104
84.5528
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
78.1375
85.3261
72.0660
79.7424
9421621179457238
52.0788
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
75.1094
82.2222
69.1293
80.3287
592128786351146
41.5954
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
84.4901
91.1227
78.7575
78.2666
3493439310692
86.7925
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
91.5350
93.7209
89.4487
79.3835
62394186587777381
49.0347
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
89.7688
92.5437
87.1556
81.5735
39223164207620247
39.8387
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
50.0000
0.0000
0.0000
11000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
94.8058
95.8213
93.8116
73.3592
23161012380157134
85.3503
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
90.9171
92.2101
89.6598
73.7675
2871724262930833801164
34.4379
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
88.5672
91.1998
86.0824
76.7383
178561723183392965857
28.9039
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
25.0000
0.0000
0.0000
39000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
95.1588
93.9924
96.3545
65.5291
1085869410969415307
73.9759
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_11to50*
90.7748
94.4594
87.3670
66.7807
45692685007724345
47.6519
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_11to50het
89.0850
93.1385
85.3697
68.5884
29322163256558215
38.5305
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_11to50homalt
94.0474
96.9194
91.3406
62.4853
1636521751166130
78.3133
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_51to200*
76.9231
75.0000
78.9474
96.1538
1241543
75.0000
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_51to200het
73.2984
70.0000
76.9231
96.4674
731032
66.6667
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
83.3333
83.3333
83.3333
95.2381
51511
100.0000
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_6to10*
98.3610
98.4844
98.2380
45.9412
617395630011346
40.7080
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_6to10het
98.0855
98.2042
97.9671
47.8546
39927340488436
42.8571
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_6to10homalt
98.9096
99.0913
98.7286
42.0919
21812022522910
34.4828
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_quadTR_11to50*
96.2926
96.8040
95.7866
41.7994
1038934310503462244
52.8139
anovak-vgSNPtilowcmp_SimpleRepeat_quadTR_11to50het
95.4770
96.4561
94.5176
45.8743
65052396603383170
44.3864