PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85951-86000 / 86044 show all
rpoplin-dv42INDELI1_5map_l250_m2_e0het
95.3846
93.9394
96.8750
96.3595
6246221
50.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
99.6837
99.7394
99.6281
54.8750
267972679102
20.0000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_51to200het
93.0824
92.4242
93.7500
93.8164
6156043
75.0000
rpoplin-dv42SNPtvmap_l150_m2_e0het
98.7872
98.8555
98.7190
75.1931
71698371679349
52.6882
rpoplin-dv42INDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l100_m2_e1hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.6408
85.0117
99.3911
29.8196
1452256146999
100.0000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI1_5map_l250_m2_e0hetalt
80.0000
100.0000
66.6667
98.5366
20210
0.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvmap_l150_m2_e0hetalt
93.0233
100.0000
86.9565
88.7255
2002033
100.0000
rpoplin-dv42INDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l100_m2_e1homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
95.8580
92.6773
99.2647
49.2537
4053240533
100.0000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI1_5map_l250_m2_e0homalt
96.7033
97.7778
95.6522
95.0378
4414421
50.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.8755
99.7514
100.0000
52.7941
16054160500
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
92.5156
3503600
rpoplin-dv42SNPtvmap_l150_m2_e0homalt
99.2738
98.7754
99.7773
74.0315
403350403399
100.0000
rpoplin-dv42INDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
100.0000
01000
rpoplin-dv42INDELC6_15map_l125_m0_e0*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
90.9091
11111
100.0000
rpoplin-dv42INDELI16_PLUSmap_l100_m0_e0*
90.9091
90.9091
90.9091
75.0000
1011010
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e1*
95.6140
95.6140
95.6140
96.1745
109510952
40.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
rpoplin-dv42SNPtvmap_l150_m2_e1*
98.9641
98.8437
99.0847
74.8658
113691331136710561
58.0952
rpoplin-dv42INDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
100.0000
01000
rpoplin-dv42INDELC6_15map_l125_m0_e0het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
85.7143
10111
100.0000
rpoplin-dv42INDELI16_PLUSmap_l100_m0_e0het
94.1176
100.0000
88.8889
66.6667
80810
0.0000
rpoplin-dv42INDELI1_5map_l250_m2_e1het
95.3846
93.9394
96.8750
96.4699
6246221
50.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
rpoplin-dv42SNPtvmap_l150_m2_e1het
98.8030
98.8704
98.7357
75.2106
72658372639349
52.6882
rpoplin-dv42INDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100