PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
85751-85800 / 86044 show all | |||||||||||||||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e0 | * | 93.2735 | 89.6552 | 97.1963 | 85.5014 | 104 | 12 | 104 | 3 | 2 | 66.6667 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e0 | het | 91.3793 | 86.8852 | 96.3636 | 85.8612 | 53 | 8 | 53 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e0 | hetalt | 97.7778 | 100.0000 | 95.6522 | 79.4643 | 22 | 0 | 22 | 1 | 0 | 0.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e0 | homalt | 93.5484 | 87.8788 | 100.0000 | 87.7637 | 29 | 4 | 29 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e1 | * | 93.2735 | 89.6552 | 97.1963 | 85.8466 | 104 | 12 | 104 | 3 | 2 | 66.6667 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e1 | het | 91.3793 | 86.8852 | 96.3636 | 86.1111 | 53 | 8 | 53 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e1 | hetalt | 97.7778 | 100.0000 | 95.6522 | 80.3419 | 22 | 0 | 22 | 1 | 0 | 0.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e1 | homalt | 93.5484 | 87.8788 | 100.0000 | 88.0658 | 29 | 4 | 29 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m0_e0 | * | 69.2308 | 60.0000 | 81.8182 | 94.9309 | 9 | 6 | 9 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m0_e0 | het | 62.5000 | 55.5556 | 71.4286 | 93.9130 | 5 | 4 | 5 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m0_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 95.0000 | 4 | 2 | 4 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m1_e0 | * | 88.0000 | 83.0189 | 93.6170 | 89.3905 | 44 | 9 | 44 | 3 | 2 | 66.6667 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m1_e0 | het | 83.6364 | 76.6667 | 92.0000 | 89.6266 | 23 | 7 | 23 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m1_e0 | hetalt | 94.1176 | 100.0000 | 88.8889 | 83.9286 | 8 | 0 | 8 | 1 | 0 | 0.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m1_e0 | homalt | 92.8571 | 86.6667 | 100.0000 | 91.0959 | 13 | 2 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e0 | * | 88.0000 | 83.0189 | 93.6170 | 90.5242 | 44 | 9 | 44 | 3 | 2 | 66.6667 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e0 | het | 83.6364 | 76.6667 | 92.0000 | 90.6015 | 23 | 7 | 23 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e0 | hetalt | 94.1176 | 100.0000 | 88.8889 | 86.3636 | 8 | 0 | 8 | 1 | 0 | 0.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e0 | homalt | 92.8571 | 86.6667 | 100.0000 | 92.0732 | 13 | 2 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e1 | * | 88.0000 | 83.0189 | 93.6170 | 90.8382 | 44 | 9 | 44 | 3 | 2 | 66.6667 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e1 | het | 83.6364 | 76.6667 | 92.0000 | 90.8425 | 23 | 7 | 23 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 94.1176 | 100.0000 | 88.8889 | 86.9565 | 8 | 0 | 8 | 1 | 0 | 0.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e1 | homalt | 92.8571 | 86.6667 | 100.0000 | 92.3977 | 13 | 2 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m0_e0 | * | 57.1429 | 50.0000 | 66.6667 | 96.5909 | 4 | 4 | 4 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m0_e0 | het | 50.0000 | 50.0000 | 50.0000 | 95.8763 | 2 | 2 | 2 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m0_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 96.8254 | 2 | 2 | 2 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m1_e0 | * | 82.6087 | 76.0000 | 90.4762 | 93.9828 | 19 | 6 | 19 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m1_e0 | het | 78.5714 | 73.3333 | 84.6154 | 93.4010 | 11 | 4 | 11 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 92.1053 | 3 | 0 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m1_e0 | homalt | 83.3333 | 71.4286 | 100.0000 | 95.6140 | 5 | 2 | 5 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e0 | * | 82.6087 | 76.0000 | 90.4762 | 94.6154 | 19 | 6 | 19 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e0 | het | 78.5714 | 73.3333 | 84.6154 | 93.9252 | 11 | 4 | 11 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 93.3333 | 3 | 0 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e0 | homalt | 83.3333 | 71.4286 | 100.0000 | 96.1832 | 5 | 2 | 5 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e1 | * | 84.0000 | 77.7778 | 91.3043 | 94.3902 | 21 | 6 | 21 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e1 | het | 80.0000 | 75.0000 | 85.7143 | 93.7500 | 12 | 4 | 12 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 93.7500 | 3 | 0 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e1 | homalt | 85.7143 | 75.0000 | 100.0000 | 95.6522 | 6 | 2 | 6 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m0_e0 | * | 0.0000 | 0.0000 | 98.9130 | 0 | 1 | 0 | 1 | 1 | 100.0000 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m0_e0 | het | 0.0000 | 0.0000 | 97.9167 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m1_e0 | * | 50.0000 | 42.8571 | 60.0000 | 97.5124 | 3 | 4 | 3 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m1_e0 | het | 50.0000 | 50.0000 | 50.0000 | 96.3303 | 2 | 2 | 2 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m1_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 98.5294 | 1 | 2 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m2_e0 | * | 57.1429 | 50.0000 | 66.6667 | 97.2603 | 4 | 4 | 4 | 2 | 2 | 100.0000 | |
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m2_e0 | het | 60.0000 | 60.0000 | 60.0000 | 95.7627 | 3 | 2 | 3 | 2 | 2 | 100.0000 | |