PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
86001-86044 / 86044 show all
rpoplin-dv42INDELI1_5map_l250_m2_e1hetalt
80.0000
100.0000
66.6667
98.5714
20210
0.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNPtvmap_l150_m2_e1hetalt
93.0233
100.0000
86.9565
88.8889
2002033
100.0000
rpoplin-dv42INDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l125_m0_e0homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
rpoplin-dv42INDELI16_PLUSmap_l100_m0_e0homalt
66.6667
50.0000
100.0000
90.9091
11100
rpoplin-dv42INDELI1_5map_l250_m2_e1homalt
96.7742
97.8261
95.7447
95.0888
4514521
50.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42SNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
rpoplin-dv42SNPtvmap_l150_m2_e1homalt
99.2828
98.7905
99.7801
74.0325
408450408499
100.0000
rpoplin-dv42INDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l125_m1_e0*
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5**
99.4429
99.3110
99.5751
58.2332
1457341011145779622549
88.2637
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
95.9540
95.2267
96.6924
48.5132
1312765813126449442
98.4410
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0*
89.7959
84.6154
95.6522
78.3019
2242210
0.0000
rpoplin-dv42INDELI1_5map_siren*
98.7675
98.5691
98.9667
80.4011
29624329693118
58.0645
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.8463
99.7898
99.9029
55.0600
617113617161
16.6667
rpoplin-dv42SNPtilowcmp_SimpleRepeat_triTR_11to50*
99.8976
99.8720
99.9231
28.9976
39015390032
66.6667
rpoplin-dv42SNPtvmap_l250_m0_e0*
96.8421
96.2092
97.4834
91.8033
736297361914
73.6842
rpoplin-dv42INDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l125_m1_e0het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5*het
99.5696
99.7077
99.4320
57.4420
8731825687348499434
86.9739
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
94.1229
98.2424
90.3349
66.0632
3801683776404398
98.5149
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0het
91.4286
88.8889
94.1176
73.0159
1621610
0.0000
rpoplin-dv42INDELI1_5map_sirenhet
98.4530
98.2748
98.6318
80.8695
16522916582315
65.2174
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.8728
99.8982
99.8474
55.2916
39274392761
16.6667
rpoplin-dv42SNPtilowcmp_SimpleRepeat_triTR_11to50het
99.8991
99.8789
99.9192
29.1154
24753247421
50.0000
rpoplin-dv42SNPtvmap_l250_m0_e0het
97.0280
97.0280
97.0280
91.3647
555175551712
70.5882
rpoplin-dv42INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l125_m1_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5*hetalt
96.7748
94.2997
99.3834
61.0557
966158496716059
98.3333
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.9410
92.7025
99.4141
25.1041
659351966173938
97.4359
rpoplin-dv42INDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
87.5000
21200
rpoplin-dv42INDELI1_5map_sirenhetalt
95.4545
93.7500
97.2222
89.4325
105710530
0.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
rpoplin-dv42SNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
rpoplin-dv42SNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000