PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1851-1900 / 86044 show all
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
20.4545
0.0000
0.0000
935000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
67.0246
87.7551
54.2169
78.5530
436453831
81.5789
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
02000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
39.0803
30.2044
55.3435
41.1500
399922725585494
84.4444
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
31.9699
22.4138
55.7303
40.4682
104360496394328
83.2487
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
22.1529
0.0000
0.0000
142499000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
61.6176
70.8333
54.5238
42.5445
15363229191166
86.9110
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
15.2866
9.6774
36.3636
52.5862
18168203530
85.7143
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
20.7254
14.2857
37.7358
50.4673
530203329
87.8788
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
8.6093
0.0000
0.0000
13138000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
77.7778
00021
50.0000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_11to50*
47.4248
37.3206
65.0316
30.6257
156262411221186
84.1629
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_11to50het
40.2391
29.5082
63.2353
29.4815
3686301175141
80.5714
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
29.9578
0.0000
0.0000
71166000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
76.2700
83.0508
70.5128
33.8983
49101104645
97.8261
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
25.8065
15.3846
80.0000
37.5000
211411
100.0000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
88.8889
100.0000
80.0000
28.5714
10411
100.0000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
8.3333
0.0000
0.0000
111000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l100_m0_e0*
61.7886
57.5758
66.6667
85.3933
191426136
46.1538
anovak-vgINDELI6_15map_l100_m0_e0het
50.0000
41.1765
63.6364
87.5706
7101481
12.5000
anovak-vgINDELI6_15map_l100_m0_e0hetalt
0.0000
75.0000
0.0000
0.0000
31000
anovak-vgINDELI6_15map_l100_m0_e0homalt
72.7273
75.0000
70.5882
81.1111
931255
100.0000
anovak-vgINDELI6_15map_l100_m1_e0*
54.0541
50.0000
58.8235
80.7547
5757604224
57.1429
anovak-vgINDELI6_15map_l100_m1_e0het
45.4208
35.5932
62.7451
82.9431
213832195
26.3158
anovak-vgINDELI6_15map_l100_m1_e0hetalt
0.0000
45.4545
0.0000
0.0000
1012000
anovak-vgINDELI6_15map_l100_m1_e0homalt
64.7111
78.7879
54.9020
77.9221
267282319
82.6087
anovak-vgINDELI6_15map_l100_m2_e0*
53.4759
49.1379
58.6538
81.9130
5759614325
58.1395
anovak-vgINDELI6_15map_l100_m2_e0het
44.6377
34.4262
63.4615
83.5962
214033195
26.3158
anovak-vgINDELI6_15map_l100_m2_e0hetalt
0.0000
45.4545
0.0000
0.0000
1012000
anovak-vgINDELI6_15map_l100_m2_e0homalt
63.9719
78.7879
53.8462
79.8450
267282420
83.3333
anovak-vgINDELI6_15map_l100_m2_e1*
53.2425
49.1379
58.0952
82.0819
5759614425
56.8182
anovak-vgINDELI6_15map_l100_m2_e1het
44.3378
34.4262
62.2642
83.5913
214033205
25.0000
anovak-vgINDELI6_15map_l100_m2_e1hetalt
0.0000
45.4545
0.0000
0.0000
1012000
anovak-vgINDELI6_15map_l100_m2_e1homalt
63.9719
78.7879
53.8462
80.2281
267282420
83.3333
anovak-vgINDELI6_15map_l125_m0_e0*
63.1579
60.0000
66.6667
88.4615
961683
37.5000
anovak-vgINDELI6_15map_l125_m0_e0het
51.9481
44.4444
62.5000
88.7324
451061
16.6667
anovak-vgINDELI6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l125_m0_e0homalt
78.9474
83.3333
75.0000
87.8788
51622
100.0000