PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1351-1400 / 86044 show all
anovak-vgINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15map_l250_m2_e0homalt
92.3077
100.0000
85.7143
94.2149
60611
100.0000
anovak-vgINDELD6_15map_l250_m2_e1*
78.6127
77.2727
80.0000
96.4413
1751643
75.0000
anovak-vgINDELD6_15map_l250_m2_e1het
77.7385
78.5714
76.9231
97.0455
1131032
66.6667
anovak-vgINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15map_l250_m2_e1homalt
92.3077
100.0000
85.7143
94.2623
60611
100.0000
anovak-vgINDELD6_15map_siren*
73.2509
67.3870
80.2326
79.8971
3431663458560
70.5882
anovak-vgINDELD6_15map_sirenhet
77.1497
77.5000
76.8025
78.9021
217632457450
67.5676
anovak-vgINDELD6_15map_sirenhetalt
0.0000
25.2525
0.0000
0.0000
2574000
anovak-vgINDELD6_15map_sirenhomalt
83.4332
77.6923
90.0901
82.2967
101291001110
90.9091
anovak-vgINDELD6_15segdup*
70.1754
62.8272
79.4702
93.2348
120711203123
74.1935
anovak-vgINDELD6_15segduphet
75.5396
76.0870
75.0000
93.8242
7022782620
76.9231
anovak-vgINDELD6_15segduphetalt
0.0000
18.3673
0.0000
0.0000
940000
anovak-vgINDELD6_15segduphomalt
85.5227
82.0000
89.3617
91.4234
4194253
60.0000
anovak-vgINDELD6_15segdupwithalt*
0.0000
100.0000
00000
anovak-vgINDELD6_15segdupwithalthet
0.0000
100.0000
00000
anovak-vgINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELD6_15tech_badpromoters*
62.0690
52.9412
75.0000
36.8421
98933
100.0000
anovak-vgINDELD6_15tech_badpromotershet
62.5000
50.0000
83.3333
14.2857
55511
100.0000
anovak-vgINDELD6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD6_15tech_badpromotershomalt
66.6667
66.6667
66.6667
50.0000
42422
100.0000
anovak-vgINDELI16_PLUS**
32.9342
25.0588
48.0286
39.2493
15984779154716741112
66.4277
anovak-vgINDELI16_PLUS*het
20.3076
12.3988
56.0773
46.0104
337238140631857
17.9245
anovak-vgINDELI16_PLUS*hetalt
0.0000
7.1020
0.0000
0.0000
1491949000
anovak-vgINDELI16_PLUS*homalt
55.6761
71.2364
45.6948
36.9604
1112449114113561055
77.8024
anovak-vgINDELI16_PLUSHG002complexvar*
33.1975
24.5225
51.3699
42.4631
321988300284225
79.2254
anovak-vgINDELI16_PLUSHG002complexvarhet
24.3337
14.7368
69.7674
51.5038
9856790399
23.0769
anovak-vgINDELI16_PLUSHG002complexvarhetalt
0.0000
5.6716
0.0000
0.0000
19316000
anovak-vgINDELI16_PLUSHG002complexvarhomalt
54.3276
66.0194
46.1538
39.2523
204105210245216
88.1633
anovak-vgINDELI16_PLUSHG002compoundhet*
11.6860
7.0929
33.1593
41.3476
1521991127256126
49.2188
anovak-vgINDELI16_PLUSHG002compoundhethet
0.0000
0.0000
45.8564
44.3077
047839829
29.5918
anovak-vgINDELI16_PLUSHG002compoundhethetalt
0.0000
7.1190
0.0000
0.0000
1491944000
anovak-vgINDELI16_PLUSHG002compoundhethomalt
35.7724
100.0000
21.7822
38.4146
304415897
61.3924
anovak-vgINDELI16_PLUSdecoy*
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSfunc_cds*
44.4444
33.3333
66.6667
50.0000
48421
50.0000
anovak-vgINDELI16_PLUSfunc_cdshet
50.0000
33.3333
100.0000
0.0000
36300
anovak-vgINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELI16_PLUSfunc_cdshomalt
40.0000
50.0000
33.3333
66.6667
11121
50.0000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
11.3706
7.7670
21.2121
59.0062
16190145210
19.2308
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
10.1868
6.3158
26.3158
62.7451
6895142
14.2857
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
086000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
25.8993
40.0000
19.1489
57.2727
10159388
21.0526
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000