PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1301-1350 / 86044 show all
anovak-vgINDELD6_15map_l100_m2_e0*
69.8453
62.5000
79.1469
85.8199
165991674427
61.3636
anovak-vgINDELD6_15map_l100_m2_e0het
75.7043
77.0992
74.3590
85.9586
101301164023
57.5000
anovak-vgINDELD6_15map_l100_m2_e0hetalt
0.0000
22.0588
0.0000
0.0000
1553000
anovak-vgINDELD6_15map_l100_m2_e0homalt
83.1614
75.3846
92.7273
85.4111
49165144
100.0000
anovak-vgINDELD6_15map_l100_m2_e1*
69.0673
61.0909
79.4393
85.8746
1681071704427
61.3636
anovak-vgINDELD6_15map_l100_m2_e1het
75.1170
75.5556
74.6835
86.0301
102331184023
57.5000
anovak-vgINDELD6_15map_l100_m2_e1hetalt
0.0000
21.9178
0.0000
0.0000
1657000
anovak-vgINDELD6_15map_l100_m2_e1homalt
82.7498
74.6269
92.8571
85.4167
50175244
100.0000
anovak-vgINDELD6_15map_l125_m0_e0*
77.7114
74.4681
81.2500
92.1824
35123997
77.7778
anovak-vgINDELD6_15map_l125_m0_e0het
80.1909
82.7586
77.7778
92.4051
2452886
75.0000
anovak-vgINDELD6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
06000
anovak-vgINDELD6_15map_l125_m0_e0homalt
91.6667
91.6667
91.6667
91.4286
1111111
100.0000
anovak-vgINDELD6_15map_l125_m1_e0*
75.8631
73.5043
78.3784
88.8554
8631872415
62.5000
anovak-vgINDELD6_15map_l125_m1_e0het
77.8285
81.2500
74.6835
89.5641
5212592011
55.0000
anovak-vgINDELD6_15map_l125_m1_e0hetalt
0.0000
31.5789
0.0000
0.0000
613000
anovak-vgINDELD6_15map_l125_m1_e0homalt
84.8485
82.3529
87.5000
86.6109
2862844
100.0000
anovak-vgINDELD6_15map_l125_m2_e0*
76.3127
73.8095
78.9916
88.9713
9333942515
60.0000
anovak-vgINDELD6_15map_l125_m2_e0het
77.7080
80.2817
75.2941
89.6341
5714642111
52.3810
anovak-vgINDELD6_15map_l125_m2_e0hetalt
0.0000
31.5789
0.0000
0.0000
613000
anovak-vgINDELD6_15map_l125_m2_e0homalt
85.7143
83.3333
88.2353
86.8726
3063044
100.0000
anovak-vgINDELD6_15map_l125_m2_e1*
76.3524
73.4375
79.5082
88.8584
9434972515
60.0000
anovak-vgINDELD6_15map_l125_m2_e1het
78.0093
80.2817
75.8621
89.5558
5714662111
52.3810
anovak-vgINDELD6_15map_l125_m2_e1hetalt
0.0000
30.0000
0.0000
0.0000
614000
anovak-vgINDELD6_15map_l125_m2_e1homalt
86.1111
83.7838
88.5714
86.6412
3163144
100.0000
anovak-vgINDELD6_15map_l150_m0_e0*
75.3769
75.0000
75.7576
93.5421
2482586
75.0000
anovak-vgINDELD6_15map_l150_m0_e0het
77.9618
85.0000
72.0000
93.6869
1731875
71.4286
anovak-vgINDELD6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
05000
anovak-vgINDELD6_15map_l150_m0_e0homalt
93.3333
100.0000
87.5000
93.0435
70711
100.0000
anovak-vgINDELD6_15map_l150_m1_e0*
80.4282
79.4521
81.4286
91.4005
581557138
61.5385
anovak-vgINDELD6_15map_l150_m1_e0het
80.3240
87.1795
74.4681
92.3948
34535127
58.3333
anovak-vgINDELD6_15map_l150_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
26000
anovak-vgINDELD6_15map_l150_m1_e0homalt
89.7959
84.6154
95.6522
88.2653
2242211
100.0000
anovak-vgINDELD6_15map_l150_m2_e0*
79.8890
78.0488
81.8182
91.2201
641863149
64.2857
anovak-vgINDELD6_15map_l150_m2_e0het
79.4212
82.6087
76.4706
92.2844
38839127
58.3333
anovak-vgINDELD6_15map_l150_m2_e0hetalt
0.0000
25.0000
0.0000
0.0000
26000
anovak-vgINDELD6_15map_l150_m2_e0homalt
88.8889
85.7143
92.3077
87.9630
2442422
100.0000
anovak-vgINDELD6_15map_l150_m2_e1*
79.8957
77.6471
82.2785
91.1236
661965149
64.2857
anovak-vgINDELD6_15map_l150_m2_e1het
79.8362
82.9787
76.9231
92.2619
39840127
58.3333
anovak-vgINDELD6_15map_l150_m2_e1hetalt
0.0000
22.2222
0.0000
0.0000
27000
anovak-vgINDELD6_15map_l150_m2_e1homalt
89.2857
86.2069
92.5926
87.6147
2542522
100.0000
anovak-vgINDELD6_15map_l250_m0_e0*
84.5070
83.3333
85.7143
97.8125
51611
100.0000
anovak-vgINDELD6_15map_l250_m0_e0het
77.4194
75.0000
80.0000
98.0695
31411
100.0000
anovak-vgINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7213
20200
anovak-vgINDELD6_15map_l250_m1_e0*
77.7778
77.7778
77.7778
96.4000
1441443
75.0000
anovak-vgINDELD6_15map_l250_m1_e0het
78.2609
81.8182
75.0000
96.9620
92932
66.6667
anovak-vgINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELD6_15map_l250_m1_e0homalt
90.9091
100.0000
83.3333
94.2857
50511
100.0000
anovak-vgINDELD6_15map_l250_m2_e0*
78.6127
77.2727
80.0000
96.3636
1751643
75.0000
anovak-vgINDELD6_15map_l250_m2_e0het
77.7385
78.5714
76.9231
96.9697
1131032
66.6667