PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
901-950 / 86044 show all | |||||||||||||||
| anovak-vg | INDEL | D16_PLUS | map_l100_m0_e0 | * | 52.3810 | 39.2857 | 78.5714 | 92.5532 | 11 | 17 | 11 | 3 | 3 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m0_e0 | het | 58.0645 | 47.3684 | 75.0000 | 90.6977 | 9 | 10 | 9 | 3 | 3 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 4 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l100_m0_e0 | homalt | 57.1429 | 40.0000 | 100.0000 | 96.6102 | 2 | 3 | 2 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l100_m1_e0 | * | 52.2205 | 37.9310 | 83.7838 | 88.2166 | 33 | 54 | 31 | 6 | 5 | 83.3333 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m1_e0 | het | 63.2911 | 50.0000 | 86.2069 | 85.6436 | 23 | 23 | 25 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m1_e0 | hetalt | 0.0000 | 7.6923 | 0.0000 | 0.0000 | 2 | 24 | 0 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l100_m1_e0 | homalt | 62.3377 | 53.3333 | 75.0000 | 92.8571 | 8 | 7 | 6 | 2 | 2 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e0 | * | 52.2346 | 37.7778 | 84.6154 | 88.4956 | 34 | 56 | 33 | 6 | 5 | 83.3333 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e0 | het | 61.7131 | 47.9167 | 86.6667 | 86.2385 | 23 | 25 | 26 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e0 | hetalt | 0.0000 | 7.6923 | 0.0000 | 0.0000 | 2 | 24 | 0 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e0 | homalt | 65.2850 | 56.2500 | 77.7778 | 92.5620 | 9 | 7 | 7 | 2 | 2 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e1 | * | 50.6599 | 36.0825 | 85.0000 | 88.3721 | 35 | 62 | 34 | 6 | 5 | 83.3333 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e1 | het | 61.1033 | 47.0588 | 87.0968 | 85.9091 | 24 | 27 | 27 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e1 | hetalt | 0.0000 | 6.6667 | 0.0000 | 0.0000 | 2 | 28 | 0 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l100_m2_e1 | homalt | 65.2850 | 56.2500 | 77.7778 | 92.7419 | 9 | 7 | 7 | 2 | 2 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m0_e0 | * | 50.0000 | 41.6667 | 62.5000 | 94.2857 | 5 | 7 | 5 | 3 | 3 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m0_e0 | het | 58.8235 | 55.5556 | 62.5000 | 91.8367 | 5 | 4 | 5 | 3 | 3 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | D16_PLUS | map_l125_m1_e0 | * | 65.2174 | 55.5556 | 78.9474 | 91.3242 | 15 | 12 | 15 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m1_e0 | het | 70.2703 | 65.0000 | 76.4706 | 88.5135 | 13 | 7 | 13 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 3 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l125_m1_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 97.1831 | 2 | 2 | 2 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e0 | * | 65.5738 | 55.5556 | 80.0000 | 91.3420 | 15 | 12 | 16 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e0 | het | 70.8171 | 65.0000 | 77.7778 | 88.4615 | 13 | 7 | 14 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 3 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 97.3333 | 2 | 2 | 2 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e1 | * | 64.1711 | 53.5714 | 80.0000 | 91.5612 | 15 | 13 | 16 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e1 | het | 70.8171 | 65.0000 | 77.7778 | 88.6792 | 13 | 7 | 14 | 4 | 3 | 75.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 4 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l125_m2_e1 | homalt | 66.6667 | 50.0000 | 100.0000 | 97.4359 | 2 | 2 | 2 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l150_m0_e0 | * | 72.7273 | 57.1429 | 100.0000 | 96.6102 | 4 | 3 | 4 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l150_m0_e0 | het | 72.7273 | 57.1429 | 100.0000 | 95.1807 | 4 | 3 | 4 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | D16_PLUS | map_l150_m1_e0 | * | 66.6667 | 53.3333 | 88.8889 | 94.7977 | 8 | 7 | 8 | 1 | 1 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l150_m1_e0 | het | 69.5652 | 57.1429 | 88.8889 | 92.3729 | 8 | 6 | 8 | 1 | 1 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l150_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e0 | * | 66.6667 | 52.9412 | 90.0000 | 94.4751 | 9 | 8 | 9 | 1 | 1 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e0 | het | 69.2308 | 56.2500 | 90.0000 | 91.9355 | 9 | 7 | 9 | 1 | 1 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e1 | * | 64.2857 | 50.0000 | 90.0000 | 94.5946 | 9 | 9 | 9 | 1 | 1 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e1 | het | 69.2308 | 56.2500 | 90.0000 | 92.1260 | 9 | 7 | 9 | 1 | 1 | 100.0000 | |
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | D16_PLUS | map_l150_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | D16_PLUS | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.3871 | 1 | 0 | 1 | 0 | 0 | ||
| anovak-vg | INDEL | D16_PLUS | map_l250_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 97.8261 | 1 | 0 | 1 | 0 | 0 | ||