PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryType SubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
551-600 / 86044 show all
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
99.6837
99.7394
99.6281
54.8750
267972679102
20.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
99.7555
99.7439
99.7671
54.1386
4284114284102
20.0000
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.7936
99.6701
99.9173
72.0908
169195616921144
28.5714
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.2280
1501500
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331het
99.5123
99.4950
99.5296
71.9110
285671452856113547
34.8148
rpoplin-dv42SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
99.6169
99.5602
99.6736
72.0020
455012014549714951
34.2282
rpoplin-dv42SNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.8787
99.8366
99.9207
56.8327
201663320166167
43.7500
rpoplin-dv42SNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
81.2500
1211200
rpoplin-dv42SNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.8560
99.8560
99.8559
61.0125
3536851353525131
60.7843
rpoplin-dv42SNP*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.8633
99.8472
99.8795
59.6020
5554685555306738
56.7164
rpoplin-dv42SNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.7997
99.7140
99.8855
65.5220
17435174521
50.0000
rpoplin-dv42SNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
99.3525
99.2706
99.4347
70.0110
2994222990176
35.2941
rpoplin-dv42SNP*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
99.5167
99.4332
99.6003
68.5145
4737274735197
36.8421
rpoplin-dv42SNP*func_cdshomalt
99.9713
99.9427
100.0000
23.1405
69754697500
rpoplin-dv42SNP*func_cdshetalt
100.0000
100.0000
100.0000
60.0000
1001000
rpoplin-dv42SNP*func_cdshet
99.9149
99.9462
99.8836
25.6262
11155611152133
23.0769
rpoplin-dv42SNP*func_cds*
99.9366
99.9449
99.9284
24.7263
181401018137133
23.0769
rpoplin-dv42SNP*decoyhomalt
0.0000
100.0000
00000
rpoplin-dv42SNP*decoyhetalt
0.0000
100.0000
00000
rpoplin-dv42SNP*decoyhet
0.0000
100.0000
00000
rpoplin-dv42SNP*decoy*
0.0000
100.0000
00000
rpoplin-dv42SNP*HG002compoundhethomalt
99.7682
99.8331
99.7035
35.1268
1076418107593229
90.6250
rpoplin-dv42SNP*HG002compoundhethetalt
99.9420
99.8840
100.0000
22.1519
861186100
rpoplin-dv42SNP*HG002compoundhethet
99.5408
99.3864
99.6957
45.1283
1409187140874332
74.4186
rpoplin-dv42SNP*HG002compoundhet*
99.6493
99.5895
99.7091
40.7188
25716106257077561
81.3333
rpoplin-dv42SNP*HG002complexvarhomalt
99.9511
99.9421
99.9601
19.9304
288407167288378115109
94.7826
rpoplin-dv42SNP*HG002complexvarhetalt
99.1974
99.6774
98.7220
36.2525
309130944
100.0000
rpoplin-dv42SNP*HG002complexvarhet
99.8978
99.8245
99.9712
18.3215
464680817464534134101
75.3731
rpoplin-dv42SNP*HG002complexvar*
99.9179
99.8694
99.9664
18.9545
753396985753221253214
84.5850
rpoplin-dv42SNP**homalt
99.9769
99.9716
99.9821
18.2100
11798263351179802211157
74.4076
rpoplin-dv42SNP**hetalt
99.4854
99.8852
99.0888
49.8858
870187088
100.0000
rpoplin-dv42SNP**het
99.9475
99.9278
99.9673
19.5765
187223413531872094613268
43.7194
rpoplin-dv42SNP***
99.9587
99.9447
99.9728
19.0681
305293016893052766832433
52.0433
raldana-dualsentieonSNPtvtech_badpromotershomalt
97.4359
97.4359
97.4359
50.6329
3813811
100.0000
raldana-dualsentieonSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvtech_badpromotershet
98.4615
96.9697
100.0000
48.3871
3213200
raldana-dualsentieonSNPtvtech_badpromoters*
97.9021
97.2222
98.5915
49.6454
7027011
100.0000
raldana-dualsentieonSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthet
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalt*
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegduphomalt
99.8765
99.9382
99.8149
89.2756
32362323666
100.0000
raldana-dualsentieonSNPtvsegduphetalt
100.0000
100.0000
100.0000
96.2766
70700
raldana-dualsentieonSNPtvsegduphet
99.3773
99.6595
99.0966
91.7904
5269185265480
0.0000
raldana-dualsentieonSNPtvsegdup*
99.5671
99.7656
99.3693
91.0002
8512208508546
11.1111