PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryType SubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
451-500 / 86044 show all
rpoplin-dv42SNP*map_l125_m1_e0het
99.0847
98.9539
99.2159
70.0178
2809529728089222128
57.6577
rpoplin-dv42SNP*map_l125_m1_e0*
99.2363
99.0558
99.4176
68.8661
4489942844893263168
63.8783
rpoplin-dv42SNP*map_l125_m0_e0homalt
99.0933
98.5101
99.6834
69.3810
661210066122120
95.2381
rpoplin-dv42SNP*map_l125_m0_e0hetalt
85.7143
100.0000
75.0000
88.4615
90933
100.0000
rpoplin-dv42SNP*map_l125_m0_e0het
98.6495
98.6418
98.6571
74.4583
124921721248917097
57.0588
rpoplin-dv42SNP*map_l125_m0_e0*
98.7955
98.5969
98.9950
72.9367
1911327219110194120
61.8557
rpoplin-dv42SNP*map_l100_m2_e1homalt
99.6343
99.4783
99.7907
63.6404
27651145276525854
93.1034
rpoplin-dv42SNP*map_l100_m2_e1hetalt
96.6292
100.0000
93.4783
84.9673
4304333
100.0000
rpoplin-dv42SNP*map_l100_m2_e1het
99.2783
99.1577
99.3992
66.0072
4650339546491281142
50.5338
rpoplin-dv42SNP*map_l100_m2_e1*
99.4091
99.2775
99.5411
65.1919
7419754074186342199
58.1871
rpoplin-dv42SNP*map_l100_m2_e0homalt
99.6325
99.4768
99.7886
63.6376
27379144273805854
93.1034
rpoplin-dv42SNP*map_l100_m2_e0hetalt
96.5517
100.0000
93.3333
85.0993
4204233
100.0000
rpoplin-dv42SNP*map_l100_m2_e0het
99.2759
99.1530
99.3992
65.9847
4600639345994278141
50.7194
rpoplin-dv42SNP*map_l100_m2_e0*
99.4070
99.2740
99.5404
65.1757
7342753773416339198
58.4071
rpoplin-dv42SNP*map_l100_m1_e0homalt
99.6291
99.4667
99.7919
61.1512
26859144268605652
92.8571
rpoplin-dv42SNP*map_l100_m1_e0hetalt
96.4706
100.0000
93.1818
83.5821
4104133
100.0000
rpoplin-dv42SNP*map_l100_m1_e0het
99.2638
99.1402
99.3876
64.2170
4496939044957277141
50.9025
rpoplin-dv42SNP*map_l100_m1_e0*
99.3983
99.2625
99.5346
63.1596
7186953471858336196
58.3333
rpoplin-dv42SNP*map_l100_m0_e0homalt
99.3564
98.9759
99.7398
62.7443
11501119115013027
90.0000
rpoplin-dv42SNP*map_l100_m0_e0hetalt
91.4286
100.0000
84.2105
84.6774
1601633
100.0000
rpoplin-dv42SNP*map_l100_m0_e0het
98.8725
98.8493
98.8958
68.4376
2096124420957234116
49.5726
rpoplin-dv42SNP*map_l100_m0_e0*
99.0394
98.8947
99.1845
66.6640
3247836332474267146
54.6816
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.8254
20200
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_51to200het
83.3333
71.4286
100.0000
96.7742
52500
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_51to200*
87.5000
77.7778
100.0000
96.7890
72700
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_11to50homalt
99.9452
99.9270
99.9635
32.1349
27362273611
100.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_11to50het
99.9241
99.9133
99.9349
33.6595
46124460732
66.6667
rpoplin-dv42SNP*lowcmp_SimpleRepeat_triTR_11to50*
99.9252
99.9048
99.9456
33.1240
73487734343
75.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_51to200homalt
98.8235
100.0000
97.6744
92.4429
4104211
100.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_51to200het
95.0297
94.1176
95.9596
92.6174
9669543
75.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_51to200*
96.1404
95.8042
96.4789
92.5654
137613754
80.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.8741
99.9407
99.8075
37.7626
674146741135
38.4615
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
58.3333
50500
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_11to50het
99.8687
99.8426
99.8949
39.6597
114151811408123
25.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_quadTR_11to50*
99.8707
99.8790
99.8625
38.9762
181612218154258
32.0000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
rpoplin-dv42SNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000