PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
49751-49800 / 86044 show all
ckim-isaacINDELD16_PLUSmap_l100_m0_e0hetalt
66.6667
50.0000
100.0000
92.5926
22200
ckim-isaacINDELD16_PLUSmap_l100_m1_e0homalt
23.5294
13.3333
100.0000
94.4444
213200
ckim-isaacINDELD16_PLUSmap_l100_m2_e0homalt
22.2222
12.5000
100.0000
95.1220
214200
ckim-isaacINDELD16_PLUSmap_l100_m2_e1homalt
22.2222
12.5000
100.0000
95.2381
214200
ckim-isaacINDELD16_PLUSmap_l125_m0_e0*
26.6667
16.6667
66.6667
96.5517
210210
0.0000
ckim-isaacINDELD16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
90.9091
21200
ckim-isaacINDELD16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
93.1034
21200
ckim-isaacINDELD16_PLUSmap_l125_m2_e1hetalt
66.6667
50.0000
100.0000
93.1034
22200
ckim-isaacINDELD16_PLUSmap_l150_m1_e0*
22.2222
13.3333
66.6667
97.7099
213210
0.0000
ckim-isaacINDELD16_PLUSmap_l150_m2_e0het
21.0526
12.5000
66.6667
97.5806
214210
0.0000
ckim-isaacINDELD16_PLUSmap_l150_m2_e1het
21.0526
12.5000
66.6667
97.6190
214210
0.0000
ckim-isaacINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9618
20200
ckim-isaacINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.7805
20200
ckim-isaacINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.7730
20200
ckim-isaacINDELD1_5map_l125_m0_e0hetalt
80.0000
66.6667
100.0000
98.0000
21200
ckim-isaacINDELD1_5map_l250_m1_e0hetalt
66.6667
100.0000
21000
ckim-isaacINDELD1_5map_l250_m2_e0hetalt
66.6667
100.0000
21000
ckim-isaacINDELD1_5map_l250_m2_e1hetalt
66.6667
100.0000
21000
ckim-isaacINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
ckim-isaacINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
80.0000
66.6667
100.0000
96.8750
21200
ckim-isaacINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.0000
20200
ckim-isaacINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.3043
20200
ckim-isaacINDELD6_15map_l150_m0_e0homalt
44.4444
28.5714
100.0000
90.4762
25200
ckim-isaacINDELD6_15map_l250_m0_e0*
50.0000
33.3333
100.0000
98.5612
24200
ckim-isaacINDELD6_15map_l250_m1_e0homalt
57.1429
40.0000
100.0000
91.3043
23200
ckim-isaacINDELD6_15map_l250_m2_e0homalt
50.0000
33.3333
100.0000
92.5926
24200
ckim-isaacINDELD6_15map_l250_m2_e1homalt
50.0000
33.3333
100.0000
93.1034
24200
ckim-isaacINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
71.4286
20200
ckim-isaacINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
25.0000
20300
ckim-isaacINDELI1_5map_l150_m0_e0hetalt
80.0000
66.6667
100.0000
97.0149
21200
ckim-isaacINDELI6_15func_cdshetalt
66.6667
50.0000
100.0000
33.3333
22200
egarrison-hhgaINDELC1_5HG002complexvar*
28.5714
100.0000
25000
egarrison-hhgaINDELC1_5HG002complexvarhet
28.5714
100.0000
25000
egarrison-hhgaINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
97.8261
20200
egarrison-hhgaINDELD16_PLUSmap_l100_m0_e0hetalt
57.1429
50.0000
66.6667
85.0000
22210
0.0000
egarrison-hhgaINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
95.1220
20200
egarrison-hhgaINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9511
20200
egarrison-hhgaINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6117
20200
egarrison-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6008
20200
egarrison-hhgaINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.8261
20200
egarrison-hhgaINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.4026
20400
egarrison-hhgaINDELD6_15map_l150_m0_e0hetalt
57.1429
40.0000
100.0000
96.4286
23100
egarrison-hhgaINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3333
20200
egarrison-hhgaINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
86.6667
20200
egarrison-hhgaINDELI16_PLUSmap_l100_m1_e0homalt
50.0000
40.0000
66.6667
92.6829
23210
0.0000
egarrison-hhgaINDELI16_PLUSmap_l100_m2_e0homalt
50.0000
40.0000
66.6667
94.6429
23210
0.0000
egarrison-hhgaINDELI16_PLUSmap_l100_m2_e1homalt
50.0000
40.0000
66.6667
94.6429
23210
0.0000
egarrison-hhgaINDELI16_PLUSmap_l125_m0_e0het
66.6667
66.6667
66.6667
91.8919
21210
0.0000
egarrison-hhgaINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
88.8889
20210
0.0000