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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 991 992 993 994 995 996 997 998 999 ... 1720 1721 » 49701-49750 / 86044 show all
gduggal-bwafb	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	40.0000	40.0000	40.0000	99.5802	2	3	2	3	2	66.6667
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	44.4444	50.0000	40.0000	99.5759	2	2	2	3	2	66.6667
gduggal-bwafb	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	80.0000	66.6667	100.0000	98.5915	2	1	1	0	0
gduggal-bwafb	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	80.0000	66.6667	100.0000	97.2973	2	1	1	0	0
gduggal-bwafb	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	97.0149	2	0	2	0	0
gduggal-bwafb	INDEL	D16_PLUS	func_cds	homalt	66.6667	50.0000	100.0000	50.0000	2	2	2	0	0
gduggal-bwafb	INDEL	D16_PLUS	map_l125_m0_e0	homalt	80.0000	100.0000	66.6667	94.6429	2	0	2	1	1	100.0000
gduggal-bwafb	INDEL	D16_PLUS	map_l125_m1_e0	hetalt		66.6667		100.0000	2	1	0	0	0
gduggal-bwafb	INDEL	D16_PLUS	map_l125_m2_e0	hetalt		66.6667		100.0000	2	1	0	0	0
gduggal-bwafb	INDEL	D16_PLUS	map_l125_m2_e1	hetalt		50.0000		100.0000	2	2	0	0	0
gduggal-bwafb	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9726	2	0	2	0	0
gduggal-bwafb	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.6296	2	0	2	0	0
gduggal-bwafb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.6248	2	0	2	0	0
gduggal-bwafb	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	97.2222	2	0	2	0	0
gduggal-bwafb	INDEL	D1_5	map_l250_m1_e0	hetalt	80.0000	66.6667	100.0000	97.2973	2	1	2	0	0
gduggal-bwafb	INDEL	D1_5	map_l250_m2_e0	hetalt	80.0000	66.6667	100.0000	97.7273	2	1	2	0	0
gduggal-bwafb	INDEL	D1_5	map_l250_m2_e1	hetalt	80.0000	66.6667	100.0000	97.8022	2	1	2	0	0
gduggal-bwafb	INDEL	D1_5	tech_badpromoters	hetalt	0.0000	100.0000	0.0000	0.0000	2	0	0	0	0
gduggal-bwafb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	57.1429	50.0000	66.6667	98.4211	2	2	2	1	1	100.0000
gduggal-bwafb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.4000	2	0	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	HG002compoundhet	homalt	3.8462	66.6667	1.9802	47.1204	2	1	2	99	98	98.9899
gduggal-bwafb	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	map_l100_m1_e0	homalt	57.1429	40.0000	100.0000	87.5000	2	3	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	map_l100_m2_e0	homalt	57.1429	40.0000	100.0000	90.0000	2	3	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	map_l100_m2_e1	homalt	57.1429	40.0000	100.0000	90.0000	2	3	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	map_l150_m1_e0	het	50.0000	33.3333	100.0000	81.8182	2	4	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	map_l150_m2_e0	het	50.0000	33.3333	100.0000	81.8182	2	4	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	map_l150_m2_e1	het	50.0000	33.3333	100.0000	81.8182	2	4	2	0	0
gduggal-bwafb	INDEL	I16_PLUS	segdup	hetalt	66.6667	50.0000	100.0000	96.0000	2	2	1	0	0
gduggal-bwafb	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
gduggal-bwafb	INDEL	I1_5	func_cds	hetalt		100.0000		100.0000	2	0	0	0	0
gduggal-bwafb	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	97.7273	2	0	2	0	0
gduggal-bwafb	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.1651	2	0	2	0	0
gduggal-bwafb	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.1651	2	0	2	0	0
gduggal-bwafb	INDEL	I6_15	func_cds	hetalt	50.0000	50.0000	50.0000	33.3333	2	2	1	1	1	100.0000
gduggal-bwafb	INDEL	I6_15	map_l150_m0_e0	het	66.6667	50.0000	100.0000	97.1429	2	2	2	0	0
gduggal-bwafb	INDEL	I6_15	map_l250_m1_e0	het	66.6667	50.0000	100.0000	97.5000	2	2	2	0	0
gduggal-bwafb	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
gduggal-bwafb	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
gduggal-bwafb	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	96.4286	2	0	2	0	0
gduggal-bwafb	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.1538	2	0	2	0	0
gduggal-bwafb	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	84.6154	2	0	2	0	0
gduggal-bwafb	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	94.5946	2	0	2	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	*	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	het	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
ckim-isaac	INDEL	D16_PLUS	HG002compoundhet	homalt	23.5294	25.0000	22.2222	66.6667	2	6	2	7	6	85.7143
ckim-isaac	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	96.4912	2	0	2	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7742	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7213	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m0_e0	het	16.6667	10.5263	40.0000	95.2381	2	17	2	3	1	33.3333

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