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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 984 985 986 987 988 989 990 991 992 ... 1720 1721 » 49351-49400 / 86044 show all
ltrigg-rtg1	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.6577	2	0	2	0	0
ltrigg-rtg1	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	70.0000	2	0	3	0	0
ltrigg-rtg1	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	70.0000	2	0	3	0	0
ltrigg-rtg2	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	66.6667	50.0000	100.0000	99.7379	2	2	2	0	0
ltrigg-rtg2	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	94.4444	2	0	2	0	0
ltrigg-rtg2	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	78.3552	66.6667	95.0139	97.4690	2	1	343	18	1	5.5556
ltrigg-rtg2	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	76.1364	66.6667	88.7417	97.5582	2	1	134	17	1	5.8824
ltrigg-rtg1	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	78.6924	66.6667	96.0114	97.4973	2	1	337	14	0	0.0000
ltrigg-rtg1	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	76.9899	66.6667	91.0959	97.5650	2	1	133	13	0	0.0000
ltrigg-rtg1	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	97.2973	2	0	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7742	2	2	3	0	0
ltrigg-rtg1	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7033	2	2	3	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	93.3333	2	0	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	91.3043	2	1	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l125_m2_e0	hetalt	80.0000	66.6667	100.0000	91.3043	2	1	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l125_m2_e1	hetalt	66.6667	50.0000	100.0000	91.6667	2	2	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l250_m1_e0	het	80.0000	66.6667	100.0000	95.4545	2	1	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l250_m2_e0	het	80.0000	66.6667	100.0000	96.0000	2	1	2	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l250_m2_e1	het	80.0000	66.6667	100.0000	96.1538	2	1	2	0	0
ltrigg-rtg1	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.8566	2	0	4	0	0
ltrigg-rtg1	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.4536	2	0	2	0	0
ltrigg-rtg1	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.4505	2	0	2	0	0
ltrigg-rtg1	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	98.6207	2	0	2	0	0
ltrigg-rtg1	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	92.3077	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.7528	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.4762	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	81.8182	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	96.5517	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.4912	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	96.9231	2	0	2	0	0
ltrigg-rtg1	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	96.9697	2	0	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*	66.6667	50.0000	100.0000	92.0000	2	2	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het	80.0000	66.6667	100.0000	95.1220	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l125_m0_e0	*	44.4444	33.3333	66.6667	88.0000	2	4	2	1	0	0.0000
ltrigg-rtg1	INDEL	I16_PLUS	map_l125_m1_e0	homalt	80.0000	66.6667	100.0000	84.6154	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l125_m2_e0	homalt	80.0000	66.6667	100.0000	88.8889	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l125_m2_e1	homalt	80.0000	66.6667	100.0000	89.4737	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l150_m0_e0	*	57.1429	50.0000	66.6667	87.5000	2	2	2	1	0	0.0000
ltrigg-rtg1	INDEL	I16_PLUS	map_l150_m1_e0	homalt	80.0000	66.6667	100.0000	84.6154	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l150_m2_e0	homalt	80.0000	66.6667	100.0000	87.5000	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l150_m2_e1	homalt	80.0000	66.6667	100.0000	87.5000	2	1	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	50.0000	2	0	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	50.0000	2	0	2	0	0
ltrigg-rtg1	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
jpowers-varprowl	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	96.1538	2	0	2	0	0
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.3035	0.0000	0.0000	2	657	0	0	0
jpowers-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.3035	0.0000	0.0000	2	657	0	0	0

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