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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 84 85 86 87 88 89 90 91 92 ... 1720 1721 » 4351-4400 / 86044 show all
eyeh-varpipe	SNP	*	segdup	het	97.2199	99.8383	94.7354	91.1282	17289	28	16861	937	7	0.7471
jmaeng-gatk	SNP	ti	HG002compoundhet	*	99.3792	98.9129	99.8498	36.3432	17288	190	17288	26	22	84.6154
bgallagher-sentieon	SNP	*	segdup	het	99.2648	99.8268	98.7091	91.1291	17287	30	17281	226	2	0.8850
jpowers-varprowl	SNP	*	map_l125_m2_e1	homalt	99.1340	98.5911	99.6828	71.9295	17285	247	17285	55	40	72.7273
jlack-gatk	SNP	*	map_l125_m2_e1	homalt	99.2279	98.5911	99.8729	66.9215	17285	247	17285	22	16	72.7273
dgrover-gatk	SNP	*	segdup	het	99.5334	99.8152	99.2533	91.5277	17285	32	17279	130	3	2.3077
jli-custom	SNP	*	segdup	het	99.4076	99.8037	99.0146	89.8653	17283	34	17283	172	2	1.1628
cchapple-custom	SNP	*	segdup	het	99.4246	99.7863	99.0654	93.2744	17280	37	17278	163	5	3.0675
ckim-dragen	SNP	*	segdup	het	97.6498	99.7863	95.6029	93.5624	17280	37	17285	795	5	0.6289
ghariani-varprowl	SNP	*	map_l125_m2_e1	homalt	99.1110	98.5626	99.6655	70.0625	17280	252	17280	58	39	67.2414
jlack-gatk	SNP	*	segdup	het	97.2497	99.7806	94.8441	94.7945	17279	38	17273	939	5	0.5325
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0538	98.3322	99.7862	63.3791	17275	293	17266	37	4	10.8108
hfeng-pmm2	SNP	*	segdup	het	99.5302	99.7344	99.3269	90.9417	17271	46	17265	117	0	0.0000
hfeng-pmm3	SNP	*	segdup	het	99.5790	99.7344	99.4241	89.8527	17271	46	17265	100	0	0.0000
raldana-dualsentieon	SNP	*	segdup	het	99.4013	99.7344	99.0704	90.7424	17271	46	17265	162	1	0.6173
gduggal-snapvard	SNP	ti	map_l100_m1_e0	homalt	97.9288	96.1470	99.7778	60.0714	17268	692	17067	38	31	81.5789
mlin-fermikit	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	98.0436	96.7173	99.4069	53.0396	17265	586	17262	103	9	8.7379
hfeng-pmm1	SNP	*	segdup	het	99.6248	99.6939	99.5558	89.5848	17264	53	17258	77	0	0.0000
rpoplin-dv42	SNP	*	segdup	het	99.7082	99.6651	99.7514	90.3344	17259	58	17253	43	3	6.9767
dgrover-gatk	SNP	*	map_l125_m2_e0	homalt	99.6075	99.3209	99.8958	66.5083	17257	118	17257	18	13	72.2222
ckim-dragen	SNP	*	map_l125_m2_e0	homalt	99.5644	99.3151	99.8150	63.8939	17256	119	17261	32	29	90.6250
jpowers-varprowl	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	97.9095	98.1671	97.6533	71.1033	17246	322	17311	416	17	4.0865
astatham-gatk	SNP	ti	HG002compoundhet	*	99.2746	98.6669	99.8899	35.7263	17245	233	17243	19	18	94.7368
rpoplin-dv42	SNP	*	map_l125_m2_e0	homalt	99.5066	99.2403	99.7743	69.1861	17243	132	17243	39	38	97.4359
egarrison-hhga	SNP	*	segdup	het	99.4921	99.5438	99.4404	89.6178	17238	79	17238	97	4	4.1237
ghariani-varprowl	SNP	*	segdup	het	96.9575	99.5207	94.5230	93.2841	17234	83	17241	999	5	0.5005
ckim-gatk	SNP	*	segdup	het	98.5246	99.5207	97.5483	94.9213	17234	83	17228	433	5	1.1547
egarrison-hhga	SNP	ti	HG002compoundhet	*	99.0004	98.5925	99.4116	34.5800	17232	246	17233	102	75	73.5294
ltrigg-rtg2	SNP	*	segdup	het	98.7596	99.4918	98.0380	86.6405	17229	88	17239	345	3	0.8696
hfeng-pmm2	SNP	tv	map_siren	homalt	99.9014	99.9014	99.9014	56.1199	17223	17	17220	17	9	52.9412
hfeng-pmm1	SNP	tv	map_siren	homalt	99.8956	99.8898	99.9014	56.0205	17221	19	17219	17	8	47.0588
gduggal-bwafb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	95.7473	94.3151	97.2237	42.8173	17221	1038	17930	512	480	93.7500
gduggal-bwafb	SNP	*	map_l125_m2_e0	homalt	99.4945	99.1137	99.8782	70.3251	17221	154	17221	21	13	61.9048
eyeh-varpipe	SNP	tv	map_siren	homalt	99.8859	99.8782	99.8937	58.0270	17219	21	16916	18	8	44.4444
jmaeng-gatk	SNP	*	segdup	het	97.9514	99.4283	96.5177	95.0045	17218	99	17212	621	2	0.3221
hfeng-pmm3	SNP	tv	map_siren	homalt	99.8898	99.8724	99.9071	55.8869	17218	22	17215	16	8	50.0000
ltrigg-rtg1	SNP	*	segdup	het	98.6738	99.4225	97.9363	87.6799	17217	100	17227	363	1	0.2755
ndellapenna-hhga	SNP	*	segdup	het	99.4196	99.4052	99.4339	89.3885	17214	103	17214	98	4	4.0816
astatham-gatk	SNP	*	map_l125_m2_e0	homalt	99.4712	99.0619	99.8839	66.1554	17212	163	17212	20	16	80.0000
ltrigg-rtg1	SNP	tv	map_siren	homalt	99.8926	99.8318	99.9535	54.5447	17211	29	17205	8	5	62.5000
raldana-dualsentieon	SNP	tv	map_siren	homalt	99.9013	99.8318	99.9710	52.2802	17211	29	17208	5	5	100.0000
gduggal-bwaplat	SNP	*	map_l150_m2_e1	*	69.5020	53.4244	99.4224	91.0196	17208	15002	17212	100	30	30.0000
gduggal-snapfb	SNP	*	segdup	het	98.5769	99.3590	97.8069	92.1233	17206	111	17215	386	16	4.1451
ltrigg-rtg2	SNP	tv	map_siren	homalt	99.8781	99.7912	99.9651	52.8102	17204	36	17198	6	4	66.6667
egarrison-hhga	SNP	tv	map_siren	homalt	99.8636	99.7854	99.9419	55.8765	17203	37	17203	10	9	90.0000
jli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.0590	97.3516	98.7767	53.3290	17203	468	17199	213	200	93.8967
jli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	98.0590	97.3516	98.7767	53.3290	17203	468	17199	213	200	93.8967
bgallagher-sentieon	SNP	tv	map_siren	homalt	99.8607	99.7854	99.9361	52.7521	17203	37	17200	11	9	81.8182
gduggal-bwafb	SNP	*	segdup	het	98.4151	99.3244	97.5223	92.8812	17200	117	17200	437	12	2.7460
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.6405	97.3120	97.9712	57.8582	17196	475	17191	356	338	94.9438

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