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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 742 743 744 745 746 747 748 749 750 ... 1720 1721 » 37251-37300 / 86044 show all
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.0588	94.2857	100.0000	76.1905	33	2	35	0	0
jmaeng-gatk	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.0588	94.2857	100.0000	92.3256	33	2	33	0	0
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	83.7867	78.5714	89.7436	95.4064	33	9	35	4	1	25.0000
ltrigg-rtg1	SNP	tv	tech_badpromoters	het	92.9577	100.0000	86.8421	59.1398	33	0	33	5	0	0.0000
ltrigg-rtg1	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	85.3774	33	1	31	0	0
jmaeng-gatk	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	56.5789	33	0	33	0	0
jpowers-varprowl	INDEL	I6_15	func_cds	*	81.4815	76.7442	86.8421	33.3333	33	10	33	5	5	100.0000
jli-custom	INDEL	D16_PLUS	map_siren	homalt	94.2857	97.0588	91.6667	92.7419	33	1	33	3	0	0.0000
jli-custom	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	87.3563	33	1	33	0	0
jli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.0588	94.2857	100.0000	74.2647	33	2	35	0	0
jli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	95.6522	94.2857	97.0588	82.5641	33	2	33	1	0	0.0000
jmaeng-gatk	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	het	95.6522	91.6667	100.0000	89.0728	33	3	33	0	0
ckim-dragen	INDEL	D16_PLUS	map_siren	homalt	89.1892	97.0588	82.5000	94.7368	33	1	33	7	2	28.5714
ckim-dragen	INDEL	D1_5	map_l250_m0_e0	het	92.9577	100.0000	86.8421	97.4132	33	0	33	5	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m1_e0	homalt	98.5075	100.0000	97.0588	87.7256	33	0	33	1	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	homalt	98.5075	100.0000	97.0588	88.9610	33	0	33	1	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	homalt	98.5075	100.0000	97.0588	89.2063	33	0	33	1	0	0.0000
ckim-dragen	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.0588	94.2857	100.0000	90.5618	33	2	42	0	0
ckim-gatk	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
ckim-gatk	INDEL	D16_PLUS	map_siren	homalt	95.6522	97.0588	94.2857	94.7368	33	1	33	2	0	0.0000
ckim-gatk	INDEL	D1_5	map_l250_m0_e0	het	82.5000	100.0000	70.2128	98.1583	33	0	33	14	0	0.0000
ckim-gatk	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	89.5899	33	1	33	0	0
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	84.6154	78.5714	91.6667	96.0656	33	9	33	3	0	0.0000
ciseli-custom	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	3.5753	0.0000	0.0000	33	890	0	0	0
ciseli-custom	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	16.6796	78.5714	9.3301	83.9601	33	9	39	379	6	1.5831
ckim-dragen	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	59.2593	33	0	33	0	0
cchapple-custom	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
cchapple-custom	INDEL	D6_15	map_l125_m2_e0	homalt	94.2857	91.6667	97.0588	85.4701	33	3	33	1	1	100.0000
ciseli-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het	74.3482	63.4615	89.7436	70.8955	33	19	35	4	4	100.0000
ciseli-custom	INDEL	D16_PLUS	map_l100_m2_e1	*	43.8881	34.0206	61.8182	89.1304	33	64	34	21	15	71.4286
ciseli-custom	INDEL	D6_15	map_l100_m0_e0	het	58.7127	55.0000	62.9630	92.9412	33	27	34	20	4	20.0000
ciseli-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	38.8235	55.9322	29.7297	69.0808	33	26	33	78	73	93.5897
ckim-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.0588	94.2857	100.0000	75.5245	33	2	35	0	0
ckim-isaac	INDEL	*	map_l250_m0_e0	het	75.8621	62.2642	97.0588	98.4760	33	20	33	1	1	100.0000
anovak-vg	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	47.6231	55.9322	41.4634	53.9326	33	26	34	48	35	72.9167
anovak-vg	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	37.4335	27.0492	60.7595	65.3509	33	89	48	31	14	45.1613
anovak-vg	SNP	ti	tech_badpromoters	het	83.5443	75.0000	94.2857	45.3125	33	11	33	2	2	100.0000
anovak-vg	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	62.6217	78.5714	52.0548	84.3011	33	9	38	35	10	28.5714
astatham-gatk	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
asubramanian-gatk	INDEL	D6_15	map_l125_m2_e1	homalt	94.2857	89.1892	100.0000	90.2077	33	4	33	0	0
bgallagher-sentieon	INDEL	D6_15	map_l125_m1_e0	homalt	98.5075	97.0588	100.0000	89.2857	33	1	33	0	0
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_homopolymer_gt10	het	52.8000	37.9310	86.8421	99.9569	33	54	33	5	5	100.0000
anovak-vg	INDEL	*	map_l100_m2_e0	hetalt	0.0000	26.4000	0.0000	0.0000	33	92	0	0	0
anovak-vg	INDEL	D16_PLUS	map_l100_m1_e0	*	52.2205	37.9310	83.7838	88.2166	33	54	31	6	5	83.3333
anovak-vg	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	26.2530	22.2973	31.9149	42.5829	33	115	105	224	205	91.5179
anovak-vg	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	13.0521	7.5688	47.3684	59.8945	33	403	72	80	25	31.2500
bgallagher-sentieon	INDEL	*	tech_badpromoters	homalt	100.0000	100.0000	100.0000	57.1429	33	0	33	0	0
bgallagher-sentieon	INDEL	D16_PLUS	map_siren	homalt	91.6667	97.0588	86.8421	94.0157	33	1	33	5	0	0.0000
bgallagher-sentieon	INDEL	D1_5	map_l250_m0_e0	het	91.6667	100.0000	84.6154	97.2898	33	0	33	6	0	0.0000
astatham-gatk	INDEL	D16_PLUS	map_siren	homalt	97.0588	97.0588	97.0588	94.9102	33	1	33	1	0	0.0000

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