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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 718 719 720 721 722 723 724 725 726 ... 1720 1721 » 36051-36100 / 86044 show all
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	40.9756	28.1879	75.0000	50.6849	42	107	81	27	27	100.0000
ghariani-varprowl	INDEL	I16_PLUS	map_siren	het	73.0435	85.7143	63.6364	80.1205	42	7	42	24	23	95.8333
ghariani-varprowl	INDEL	I1_5	map_l250_m2_e1	homalt	94.3820	91.3043	97.6744	93.9266	42	4	42	1	1	100.0000
ghariani-varprowl	INDEL	D16_PLUS	map_l100_m1_e0	het	70.0000	91.3043	56.7568	95.0634	42	4	42	32	22	68.7500
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	18.9387	11.0818	65.0794	81.9484	42	337	41	22	12	54.5455
ghariani-varprowl	INDEL	D1_5	map_l250_m0_e0	*	75.6757	91.3043	64.6154	97.7586	42	4	42	23	2	8.6957
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	17.0622	9.6110	75.9259	78.6561	42	395	41	13	13	100.0000
gduggal-snapplat	SNP	ti	tech_badpromoters	het	93.3333	95.4545	91.3043	68.9189	42	2	42	4	0	0.0000
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	26.6667	33.8710	21.9895	96.6397	42	82	42	149	5	3.3557
gduggal-snapvard	INDEL	D16_PLUS	HG002compoundhet	*	3.4436	1.7941	42.7184	52.9680	42	2299	44	59	35	59.3220
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e0	homalt	82.3529	70.0000	100.0000	96.7807	42	18	48	0	0
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e1	homalt	82.3529	70.0000	100.0000	96.8545	42	18	48	0	0
ndellapenna-hhga	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	38.2353	42	1	42	0	0
ndellapenna-hhga	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	het	75.6258	63.6364	93.1818	93.3131	42	24	41	3	3	100.0000
mlin-fermikit	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	83.1683	97.6744	72.4138	74.4493	42	1	42	16	14	87.5000
ltrigg-rtg2	INDEL	D16_PLUS	map_l100_m2_e0	het	91.2052	87.5000	95.2381	86.0000	42	6	40	2	1	50.0000
ltrigg-rtg2	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	48.1481	42	1	42	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	81.6591	71.1864	95.7447	71.8563	42	17	45	2	2	100.0000
ltrigg-rtg2	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	33.3333	42	1	42	0	0
qzeng-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	86.3374	97.6744	77.3585	67.4847	42	1	41	12	5	41.6667
qzeng-custom	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	63.9167	73.6842	56.4356	98.6567	42	15	57	44	0	0.0000
qzeng-custom	INDEL	I1_5	map_l250_m2_e0	het	75.4127	63.6364	92.5373	98.3941	42	24	62	5	4	80.0000
qzeng-custom	INDEL	I1_5	map_l250_m2_e1	het	75.4491	63.6364	92.6471	98.4019	42	24	63	5	4	80.0000
mlin-fermikit	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt	93.3333	93.3333	93.3333	72.5610	42	3	42	3	2	66.6667
ndellapenna-hhga	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	65.8913	84.0000	54.2056	64.5695	42	8	58	49	46	93.8776
ndellapenna-hhga	INDEL	D16_PLUS	map_l100_m1_e0	het	87.3023	91.3043	83.6364	88.7526	42	4	46	9	5	55.5556
ckim-vqsr	INDEL	D1_5	map_l100_m2_e1	hetalt	90.3226	82.3529	100.0000	91.7939	42	9	43	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	93.3805	89.3617	97.7778	82.0000	42	5	44	1	1	100.0000
ckim-vqsr	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.3401	42	3	42	0	0
ckim-vqsr	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	41.0959	42	1	42	1	1	100.0000
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	93.3333	91.3043	95.4545	68.5714	42	4	42	2	2	100.0000
dgrover-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.7701	42	2	42	0	0
dgrover-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.6552	42	2	42	0	0
dgrover-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	38.5714	42	1	42	1	1	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.6744	95.4545	100.0000	75.7225	42	2	42	0	0
dgrover-gatk	SNP	*	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	73.2484	42	1	42	0	0
dgrover-gatk	SNP	tv	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	73.2484	42	1	42	0	0
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	56.0000	84.0000	42.0000	67.7419	42	8	42	58	51	87.9310
egarrison-hhga	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	36.3636	42	1	42	0	0
egarrison-hhga	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	52.8090	42	1	42	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	64.6154	48.8372	95.4545	66.4122	42	44	42	2	2	100.0000
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	64.1449	48.2759	95.5556	76.5625	42	45	43	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.3401	42	3	42	0	0
ckim-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	41.0959	42	1	42	1	1	100.0000
cchapple-custom	INDEL	D1_5	map_l100_m2_e0	hetalt	0.0000	87.5000	0.0000	0.0000	42	6	0	0	0
cchapple-custom	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	47.5000	42	1	42	0	0
cchapple-custom	INDEL	I16_PLUS	HG002compoundhet	het	93.8692	89.3617	98.8556	50.9675	42	5	2505	29	26	89.6552
ckim-dragen	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	94.3820	95.4545	93.3333	96.9512	42	2	42	3	1	33.3333
ckim-dragen	INDEL	D1_5	map_l100_m2_e0	hetalt	93.3333	87.5000	100.0000	90.3153	42	6	43	0	0
ckim-dragen	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	56.7010	42	1	42	0	0

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