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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 713 714 715 716 717 718 719 720 721 ... 1720 1721 » 35801-35850 / 86044 show all
hfeng-pmm2	INDEL	I6_15	segdup	hetalt	97.7273	95.5556	100.0000	90.1376	43	2	43	0	0
hfeng-pmm3	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	93.4783	87.7551	100.0000	29.5082	43	6	43	0	0
hfeng-pmm3	INDEL	D1_5	map_l100_m2_e0	hetalt	94.5055	89.5833	100.0000	90.2655	43	5	44	0	0
hfeng-pmm3	INDEL	D6_15	segdup	hetalt	93.4783	87.7551	100.0000	90.3587	43	6	43	0	0
hfeng-pmm3	SNP	*	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	78.1726	43	0	43	0	0
hfeng-pmm3	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	44.1558	43	1	43	0	0
hfeng-pmm3	SNP	tv	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	78.1726	43	0	43	0	0
gduggal-bwafb	INDEL	D1_5	map_l250_m0_e0	*	94.5055	93.4783	95.5556	97.5179	43	3	43	2	0	0.0000
gduggal-bwafb	INDEL	D6_15	map_l150_m2_e0	het	95.7563	93.4783	98.1481	89.2000	43	3	53	1	0	0.0000
gduggal-bwafb	INDEL	I1_5	segdup	hetalt	92.2122	89.5833	95.0000	97.6771	43	5	19	1	1	100.0000
gduggal-bwafb	INDEL	I6_15	map_l100_m2_e0	het	82.6923	70.4918	100.0000	82.5175	43	18	50	0	0
gduggal-bwafb	INDEL	I6_15	map_l100_m2_e1	het	82.6923	70.4918	100.0000	82.8179	43	18	50	0	0
gduggal-bwavard	INDEL	I1_5	map_l250_m2_e1	homalt	94.5055	93.4783	95.5556	92.6948	43	3	43	2	1	50.0000
gduggal-bwaplat	INDEL	D6_15	map_l100_m1_e0	homalt	80.3738	67.1875	100.0000	87.6081	43	21	43	0	0
gduggal-bwaplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	68.2540	52.4390	97.7273	85.7605	43	39	43	1	1	100.0000
gduggal-bwaplat	INDEL	I1_5	map_l250_m2_e0	*	55.1282	38.0531	100.0000	99.0247	43	70	43	0	0
eyeh-varpipe	INDEL	I6_15	segdup	homalt	82.6923	91.4894	75.4386	87.6356	43	4	43	14	14	100.0000
eyeh-varpipe	SNP	*	map_l100_m2_e1	hetalt	99.6805	100.0000	99.3631	67.6289	43	0	312	2	1	50.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e1	hetalt	99.4012	100.0000	98.8095	70.6294	43	0	166	2	1	50.0000
eyeh-varpipe	INDEL	I1_5	map_l250_m1_e0	homalt	98.0930	97.7273	98.4615	95.3472	43	1	64	1	1	100.0000
eyeh-varpipe	INDEL	I6_15	map_l100_m1_e0	het	79.4144	72.8814	87.2340	74.7312	43	16	82	12	10	83.3333
gduggal-bwaplat	INDEL	D16_PLUS	map_l100_m2_e1	*	60.9929	44.3299	97.7273	95.8015	43	54	43	1	1	100.0000
ghariani-varprowl	INDEL	I6_15	*	hetalt	0.0000	0.5029	0.0000	0.0000	43	8508	0	0	0
ghariani-varprowl	INDEL	I6_15	HG002compoundhet	hetalt	0.0000	0.5037	0.0000	0.0000	43	8494	0	0	0
ghariani-varprowl	SNP	ti	tech_badpromoters	het	94.5055	97.7273	91.4894	52.0408	43	1	43	4	0	0.0000
ghariani-varprowl	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	1.6033	0.0000	0.0000	43	2639	0	0	0
gduggal-snapfb	INDEL	D1_5	map_l250_m0_e0	*	91.4894	93.4783	89.5833	97.2650	43	3	43	5	0	0.0000
gduggal-snapfb	INDEL	D1_5	segdup	hetalt	90.5263	82.6923	100.0000	98.1308	43	9	14	0	0
gduggal-snapfb	INDEL	I1_5	map_l250_m1_e0	homalt	95.5556	97.7273	93.4783	96.7742	43	1	43	3	2	66.6667
gduggal-snapfb	INDEL	I1_5	segdup	hetalt	87.9440	89.5833	86.3636	97.6471	43	5	19	3	1	33.3333
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	59.4318	53.0864	67.5000	54.5455	43	38	54	26	25	96.1538
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	50.0000	39.0909	69.3548	97.6108	43	67	43	19	8	42.1053
gduggal-snapplat	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	*	27.4760	30.0699	25.2941	98.0122	43	100	43	127	9	7.0866
gduggal-snapplat	INDEL	*	map_siren	hetalt	28.1292	17.4089	73.2143	97.8495	43	204	41	15	8	53.3333
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	58.1081	0.0000	0.0000	43	31	0	0	0
gduggal-snapvard	INDEL	D6_15	map_l150_m2_e1	het	79.3149	91.4894	70.0000	89.2473	43	4	70	30	19	63.3333
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	38.3929	0.0000	0.0000	43	69	0	0	0
ltrigg-rtg1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	71.6216	43	0	42	0	0
jli-custom	INDEL	I6_15	segdup	hetalt	97.7273	95.5556	100.0000	90.0693	43	2	43	0	0
jli-custom	SNP	*	map_l100_m2_e1	hetalt	98.8506	100.0000	97.7273	74.8571	43	0	43	1	1	100.0000
jli-custom	SNP	ti	tech_badpromoters	het	98.8506	97.7273	100.0000	46.9136	43	1	43	0	0
jli-custom	SNP	tv	map_l100_m2_e1	hetalt	98.8506	100.0000	97.7273	74.8571	43	0	43	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	57.0000	43	0	43	0	0
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.0833	43	0	43	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	segdup	hetalt	93.4783	87.7551	100.0000	90.8898	43	6	43	0	0
jmaeng-gatk	INDEL	I16_PLUS	HG002compoundhet	het	84.9656	91.4894	79.3103	93.9959	43	4	23	6	6	100.0000
jmaeng-gatk	INDEL	I1_5	map_l250_m1_e0	homalt	96.6292	97.7273	95.5556	94.2085	43	1	43	2	2	100.0000
jmaeng-gatk	INDEL	I6_15	segdup	hetalt	97.7273	95.5556	100.0000	89.7862	43	2	43	0	0
ltrigg-rtg1	SNP	*	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	65.3226	43	0	43	0	0
ltrigg-rtg1	SNP	tv	map_l100_m2_e1	hetalt	100.0000	100.0000	100.0000	65.3226	43	0	43	0	0

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