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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 649 650 651 652 653 654 655 656 657 ... 1720 1721 » 32601-32650 / 86044 show all
ciseli-custom	INDEL	D1_5	func_cds	het	88.2979	97.6471	80.5825	43.4066	83	2	83	20	4	20.0000
ckim-dragen	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.0238	83	2	83	1	1	100.0000
cchapple-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	97.6471	0.0000	0.0000	83	2	0	0	0
cchapple-custom	INDEL	I6_15	segdup	het	99.6255	100.0000	99.2537	92.8034	83	0	133	1	0	0.0000
ciseli-custom	INDEL	*	map_l150_m0_e0	homalt	61.1885	50.6098	77.3585	93.7537	83	81	82	24	15	62.5000
ckim-gatk	INDEL	D6_15	map_l150_m2_e1	*	96.5116	97.6471	95.4023	94.2039	83	2	83	4	0	0.0000
jli-custom	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	91.1230	83	2	83	0	0
jmaeng-gatk	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	45.4545	83	2	83	1	1	100.0000
jpowers-varprowl	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	0.6030	0.0000	0.0000	83	13681	0	0	0
jmaeng-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	89.2473	92.2222	86.4583	95.4717	83	7	83	13	4	30.7692
jmaeng-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.4328	83	2	83	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	map_l150_m2_e1	*	97.6471	97.6471	97.6471	94.2490	83	2	83	2	0	0.0000
jmaeng-gatk	INDEL	I16_PLUS	map_siren	*	94.8959	96.5116	93.3333	92.9961	83	3	84	6	1	16.6667
jpowers-varprowl	SNP	ti	tech_badpromoters	*	96.5116	97.6471	95.4023	51.1236	83	2	83	4	1	25.0000
rpoplin-dv42	INDEL	D6_15	map_l150_m2_e1	*	98.2249	97.6471	98.8095	91.9617	83	2	83	1	1	100.0000
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	*	90.2174	82.1782	100.0000	93.4543	83	18	83	0	0
raldana-dualsentieon	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	42.8571	83	2	83	1	1	100.0000
dgrover-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.8795	83	2	83	1	1	100.0000
ckim-vqsr	INDEL	D16_PLUS	map_l100_m2_e0	*	90.2174	92.2222	88.2979	95.8952	83	7	83	11	4	36.3636
ckim-vqsr	INDEL	I16_PLUS	map_siren	*	97.0895	96.5116	97.6744	93.2230	83	3	84	2	0	0.0000
egarrison-hhga	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	95.4023	93.2584	97.6471	70.5882	83	6	83	2	1	50.0000
ckim-isaac	INDEL	D1_5	map_l250_m1_e0	*	64.8438	48.5380	97.6471	96.7779	83	88	83	2	2	100.0000
ckim-isaac	INDEL	I16_PLUS	HG002complexvar	hetalt	38.7208	24.7761	88.5714	62.2302	83	252	93	12	10	83.3333
gduggal-snapfb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	60.0266	74.1071	50.4425	79.7491	83	29	57	56	18	32.1429
gduggal-snapfb	INDEL	I6_15	map_l100_m1_e0	*	81.3037	72.8070	92.0455	76.5957	83	31	81	7	6	85.7143
gduggal-snapplat	INDEL	D6_15	segdup	*	57.7618	43.4555	86.1111	95.1968	83	108	62	10	1	10.0000
gduggal-snapplat	INDEL	I1_5	map_l250_m2_e1	*	79.0476	72.8070	86.4583	98.4991	83	31	83	13	0	0.0000
gduggal-snapvard	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	34.9312	22.1925	82.0000	62.4060	83	291	41	9	9	100.0000
gduggal-snapvard	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	45.0912	56.0811	37.7029	22.3084	83	65	302	499	460	92.1844
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	87.6900	83	2	81	0	0
qzeng-custom	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	62.0711	51.5528	77.9817	37.7143	83	78	85	24	22	91.6667
mlin-fermikit	INDEL	D1_5	map_l150_m0_e0	het	58.0395	41.0891	98.7952	83.7573	83	119	82	1	0	0.0000
ndellapenna-hhga	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	92.7374	90.2174	95.4023	68.7050	83	9	83	4	3	75.0000
ndellapenna-hhga	INDEL	I6_15	segdup	het	99.3939	98.7952	100.0000	92.8007	82	1	82	0	0
ndellapenna-hhga	INDEL	D1_5	map_l150_m0_e0	homalt	97.6190	96.4706	98.7952	90.1425	82	3	82	1	1	100.0000
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	95.9064	92.1348	100.0000	61.9512	82	7	78	0	0
ltrigg-rtg2	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	het	84.0961	80.3922	88.1579	92.2449	82	20	67	9	2	22.2222
qzeng-custom	INDEL	D6_15	map_siren	hetalt	0.0000	82.8283	0.0000	0.0000	82	17	0	0	0
jpowers-varprowl	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	17.9562	55.4054	10.7143	41.9355	82	66	81	675	674	99.8519
ltrigg-rtg1	INDEL	D6_15	map_l150_m2_e1	*	98.2036	96.4706	100.0000	88.0419	82	3	80	0	0
jmaeng-gatk	INDEL	I6_15	segdup	het	95.9064	98.7952	93.1818	95.3733	82	1	82	6	0	0.0000
jli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	92.6554	86.3158	100.0000	88.5321	82	13	75	0	0
gduggal-bwaplat	INDEL	I1_5	map_l150_m2_e0	homalt	57.9505	40.7960	100.0000	95.3803	82	119	82	0	0
gduggal-bwafb	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	90.3657	84.5361	97.0588	20.9302	82	15	33	1	1	100.0000
gduggal-bwavard	INDEL	I6_15	map_l100_m2_e0	*	72.2467	70.6897	73.8739	87.7212	82	34	82	29	19	65.5172
gduggal-bwavard	INDEL	I6_15	map_l100_m2_e1	*	72.2467	70.6897	73.8739	87.9870	82	34	82	29	19	65.5172
astatham-gatk	INDEL	D16_PLUS	map_l100_m2_e0	*	89.1304	91.1111	87.2340	95.4369	82	8	82	12	4	33.3333
astatham-gatk	INDEL	I16_PLUS	map_siren	*	94.2920	95.3488	93.2584	92.7642	82	4	83	6	1	16.6667
hfeng-pmm2	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.2036	96.4706	100.0000	57.8680	82	3	83	0	0
hfeng-pmm2	INDEL	I6_15	segdup	het	99.3939	98.7952	100.0000	93.5280	82	1	82	0	0

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