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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 476 477 478 479 480 481 482 483 484 ... 1720 1721 » 23951-24000 / 86044 show all
gduggal-bwafb	INDEL	I1_5	map_l100_m0_e0	*	97.3901	96.3168	98.4877	84.2137	523	20	521	8	2	25.0000
eyeh-varpipe	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.5100	99.6190	99.4012	66.6667	523	2	498	3	0	0.0000
bgallagher-sentieon	INDEL	I1_5	map_l150_m2_e1	*	98.4039	98.4934	98.3146	90.3068	523	8	525	9	2	22.2222
bgallagher-sentieon	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.9045	99.8092	100.0000	64.1043	523	1	523	0	0
astatham-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.9045	99.8092	100.0000	64.2026	523	1	523	0	0
astatham-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	67.4953	523	2	523	0	0
anovak-vg	INDEL	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	13.6768	0.0000	0.0000	523	3301	0	0	0
astatham-gatk	INDEL	I1_5	map_l100_m0_e0	*	97.3957	96.3168	98.4991	85.7449	523	20	525	8	3	37.5000
ckim-vqsr	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	67.3737	523	2	523	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	72.5970	78.6466	67.4115	73.7023	523	142	362	175	146	83.4286
dgrover-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.9045	99.8092	100.0000	64.4942	523	1	523	0	0
egarrison-hhga	INDEL	I1_5	map_l150_m2_e1	*	98.4008	98.4934	98.3083	90.5304	523	8	523	9	2	22.2222
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	67.6961	523	2	523	0	0
jli-custom	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.9045	99.8092	100.0000	65.9727	523	1	523	0	0
ckim-gatk	INDEL	I1_5	map_l150_m2_e1	*	97.0398	98.4934	95.6284	92.9688	523	8	525	24	3	12.5000
ckim-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.9045	99.8092	100.0000	64.1781	523	1	523	0	0
ckim-dragen	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	98.6255	99.2410	98.0176	83.6632	523	4	445	9	9	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	67.6161	523	2	523	0	0
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	63.7883	523	2	520	0	0
ltrigg-rtg2	INDEL	I1_5	map_l100_m0_e0	*	97.5715	96.3168	98.8593	76.8994	523	20	520	6	1	16.6667
ndellapenna-hhga	INDEL	I1_5	map_l150_m2_e1	*	98.6792	98.4934	98.8658	90.1251	523	8	523	6	1	16.6667
ndellapenna-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.6190	99.6190	99.6190	68.6754	523	2	523	2	1	50.0000
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	69.3435	523	2	523	0	0
rpoplin-dv42	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6183	99.6183	99.6183	66.9401	522	2	522	2	1	50.0000
raldana-dualsentieon	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6183	99.6183	99.6183	63.0465	522	2	522	2	1	50.0000
ckim-vqsr	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.8088	99.6183	100.0000	64.2221	522	2	522	0	0
dgrover-gatk	INDEL	I1_5	map_l150_m2_e1	*	98.4930	98.3051	98.6817	90.9679	522	9	524	7	2	28.5714
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	68.2551	91.4186	54.4569	32.9265	522	49	2963	2478	2470	99.6772
eyeh-varpipe	INDEL	I1_5	map_l100_m2_e0	homalt	97.3779	98.3051	96.4680	82.5231	522	9	874	32	29	90.6250
jlack-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.8088	99.6183	100.0000	63.4198	522	2	522	0	0
hfeng-pmm2	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	98.7701	97.5701	100.0000	73.5650	522	13	525	0	0
hfeng-pmm2	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6183	99.6183	99.6183	69.2308	522	2	522	2	1	50.0000
hfeng-pmm3	INDEL	I1_5	map_l150_m2_e1	*	98.4006	98.3051	98.4962	88.9741	522	9	524	8	2	25.0000
hfeng-pmm3	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7135	99.6183	99.8088	66.4313	522	2	522	1	1	100.0000
ghariani-varprowl	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	97.2067	99.6183	94.9091	73.8841	522	2	522	28	19	67.8571
gduggal-snapfb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	92.7176	99.4286	86.8552	76.5326	522	3	522	79	2	2.5317
qzeng-custom	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	89.6574	81.4353	99.7264	37.3608	522	119	729	2	2	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	95.8781	99.0512	92.9019	82.4220	522	5	445	34	34	100.0000
jpowers-varprowl	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.3100	99.6183	93.2143	76.1499	522	2	522	38	20	52.6316
jmaeng-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7135	99.6183	99.8088	64.2271	522	2	522	1	1	100.0000
cchapple-custom	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7125	99.6183	99.8069	55.4600	522	2	517	1	1	100.0000
ciseli-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	93.4194	99.4286	88.0952	73.9938	522	3	518	70	10	14.2857
cchapple-custom	INDEL	I1_5	map_l100_m2_e0	homalt	98.7651	98.1168	99.4220	80.4520	521	10	516	3	2	66.6667
jlack-gatk	INDEL	I1_5	map_l150_m2_e1	*	95.3476	98.1168	92.7305	92.6905	521	10	523	41	4	9.7561
hfeng-pmm1	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6176	99.4275	99.8084	67.3342	521	3	521	1	1	100.0000
gduggal-bwafb	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.4278	99.2381	99.6183	71.9185	521	4	522	2	0	0.0000
gduggal-bwaplat	INDEL	I1_5	map_l125_m2_e0	*	75.4526	60.7935	99.4275	94.2638	521	336	521	3	1	33.3333
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	84.9987	79.7856	90.9408	61.8351	521	132	522	52	45	86.5385
egarrison-hhga	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	57.3427	40.2628	99.5902	49.2196	521	773	486	2	2	100.0000
jpowers-varprowl	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	46.6236	78.3459	33.1864	69.7120	521	144	527	1061	1053	99.2460

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