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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
1151-1200 / 86044 show all
jlack-gatkSNPtimap_sirenhet
97.5925
99.4357
95.8164
66.8895
62030352620212708216
7.9764
rpoplin-dv42SNPtimap_sirenhet
99.5664
99.3973
99.7362
53.8516
620063766199716494
57.3171
raldana-dualsentieonSNPtimap_sirenhet
99.3661
99.3941
99.3382
55.1273
62004378619954138
1.9371
ghariani-varprowlSNPtimap_sirenhet
98.6913
99.3636
98.0280
62.9270
61985397619871247191
15.3168
hfeng-pmm1SNPtimap_sirenhet
99.5806
99.3331
99.8292
52.2251
619664166195710624
22.6415
gduggal-bwafbSNPtimap_sirenhet
99.0568
99.3219
98.7930
59.4400
6195942361963757131
17.3052
egarrison-hhgaSNPtimap_sirenhet
99.5580
99.2867
99.8308
53.2460
619374456193810538
36.1905
ciseli-customINDEL*HG002complexvar*
81.0665
80.3871
81.7575
57.5412
618451508961574137398055
58.6287
ltrigg-rtg1SNPtimap_sirenhet
99.2961
98.9388
99.6561
47.8678
617196626171821310
4.6948
ndellapenna-hhgaSNPtimap_sirenhet
99.3687
98.9067
99.8350
52.2716
617006826170110239
38.2353
astatham-gatkSNP*map_l100_m1_e0*
91.9136
85.1664
99.8219
69.0267
61663107406165211052
47.2727
ltrigg-rtg2SNPtimap_sirenhet
99.2569
98.8202
99.6976
45.2238
616457366164618711
5.8824
gduggal-snapfbSNPtimap_sirenhet
98.2591
98.8009
97.7232
58.6413
61634748616361436494
34.4011
cchapple-customSNPtimap_sirenhet
98.0329
98.5813
97.4906
61.4640
61497885615381584362
22.8535
jmaeng-gatkSNP*map_l100_m2_e1*
89.5016
82.2404
98.1693
79.7702
614641327361453114679
6.8935
ckim-gatkSNP*map_l100_m2_e1*
89.5170
82.2096
98.2503
79.5686
614411329661430109486
7.8611
ciseli-customSNP*map_l100_m2_e1*
85.2411
82.0102
88.7370
71.8319
61292134456109977552048
26.4088
ckim-isaacINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
96.4197
94.8503
98.0420
61.5230
611133318609871218972
79.8030
jpowers-varprowlSNPtimap_sirenhet
98.2302
97.8231
98.6406
61.2920
61024135861026841198
23.5434
jmaeng-gatkSNP*map_l100_m2_e0*
89.4136
82.0994
98.1585
79.7900
607241324060713113979
6.9359
ckim-gatkSNP*map_l100_m2_e0*
89.4294
82.0710
98.2373
79.5869
607031326160692108986
7.8972
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
94.5807
94.0681
95.0990
73.7052
6060938226153031711742
54.9354
ciseli-customSNP*map_l100_m2_e0*
85.1771
81.9318
88.6900
71.8362
60600133646041377042033
26.3889
egarrison-hhgaINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
93.9659
93.6956
94.2379
71.6964
6036940626044736963375
91.3149
gduggal-bwavardSNPtimap_sirenhet
96.4374
96.7603
96.1167
68.4382
603612021598492418250
10.3391
bgallagher-sentieonINDELI1_5*homalt
99.6433
99.8593
99.4283
55.0054
603438560348347343
98.8473
dgrover-gatkINDELI1_5*homalt
99.7224
99.8577
99.5874
55.4630
603428660347250246
98.4000
astatham-gatkINDELI1_5*homalt
99.7125
99.8544
99.5710
55.1217
603408860345260257
98.8462
jli-customINDELI1_5*homalt
99.8065
99.8527
99.7603
53.8126
603398960343145140
96.5517
jmaeng-gatkINDELI1_5*homalt
99.7149
99.8444
99.5857
55.4032
603349460340251245
97.6096
ckim-gatkINDELI1_5*homalt
99.7125
99.8428
99.5825
55.2232
603339560339253249
98.4190
raldana-dualsentieonINDELI1_5*homalt
99.6902
99.8428
99.5381
54.0742
603339560337280279
99.6429
ckim-vqsrINDELI1_5*homalt
99.7099
99.8312
99.5890
55.2277
6032610260332249247
99.1968
hfeng-pmm2INDELI1_5*homalt
99.7668
99.8262
99.7075
52.8322
6032310560327177174
98.3051
cchapple-customINDELI1_5*homalt
99.7155
99.8147
99.6166
51.9774
6031611259755230228
99.1304
jlack-gatkINDELI1_5*homalt
99.5330
99.8014
99.2660
55.8866
6030812060314446434
97.3094
hfeng-pmm3INDELI1_5*homalt
99.7866
99.8014
99.7717
52.1729
6030812060313138134
97.1014
ckim-dragenINDELI1_5*homalt
99.5565
99.7948
99.3194
55.1956
6030412460271413409
99.0315
hfeng-pmm1INDELI1_5*homalt
99.7725
99.7799
99.7651
52.5960
6029513360299142137
96.4789
ndellapenna-hhgaINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
93.9899
93.5543
94.4295
71.2140
6027841536036535613233
90.7891
ltrigg-rtg1INDELI1_5*homalt
99.7620
99.6227
99.9017
50.6392
60199228599785947
79.6610
ltrigg-rtg2INDELI1_5*homalt
99.7495
99.5797
99.9200
48.8836
60173254599554838
79.1667
asubramanian-gatkINDELI1_5*homalt
99.5606
99.5449
99.5763
55.0778
6015327560163256247
96.4844
gduggal-snapplatSNPtimap_sirenhet
96.8090
96.4253
97.1959
70.5211
601522230602421738830
47.7560
mlin-fermikitINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
94.5891
93.3138
95.8997
71.5881
6012343086006125682492
97.0405
rpoplin-dv42INDELI1_5*homalt
99.6318
99.4026
99.8620
52.4571
60067361600648377
92.7711
egarrison-hhgaINDELI1_5*homalt
99.4873
99.3910
99.5837
52.1988
6006036860044251188
74.9004
ndellapenna-hhgaINDELI1_5*homalt
99.4589
99.3199
99.5983
51.5644
6001741160008242186
76.8595
gduggal-snapvardSNPtimap_sirenhet
95.3627
96.2088
94.5314
68.3335
600172365594993442355
10.3138
qzeng-customINDELI1_5*homalt
99.1725
99.1196
99.2255
48.3268
5989653259833467326
69.8073