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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 205 206 207 208 209 210 211 212 213 ... 1720 1721 » 10401-10450 / 86044 show all
gduggal-bwafb	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	21.6059	5272	3	5272	0	0
dgrover-gatk	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.7443	5272	3	5272	0	0
bgallagher-sentieon	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.6954	5272	3	5272	0	0
ghariani-varprowl	SNP	ti	func_cds	homalt	99.8769	99.9431	99.8107	21.2934	5272	3	5272	10	7	70.0000
jli-custom	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.7443	5272	3	5272	0	0
jpowers-varprowl	SNP	ti	func_cds	homalt	99.9052	99.9431	99.8674	21.7810	5272	3	5272	7	7	100.0000
rpoplin-dv42	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	21.4775	5272	3	5272	0	0
jlack-gatk	SNP	tv	segdup	het	96.4748	99.7163	93.4374	95.6607	5272	15	5268	370	0	0.0000
jlack-gatk	SNP	ti	func_cds	homalt	99.9621	99.9242	100.0000	19.9058	5271	4	5271	0	0
hfeng-pmm3	SNP	tv	segdup	het	99.6218	99.6974	99.5464	90.8847	5271	16	5267	24	0	0.0000
cchapple-custom	SNP	ti	func_cds	homalt	99.9621	99.9242	100.0000	19.3326	5271	4	5270	0	0
jli-custom	SNP	tv	segdup	het	99.3872	99.6974	99.0789	90.9422	5271	16	5271	49	0	0.0000
hfeng-pmm1	SNP	tv	segdup	het	99.6406	99.6785	99.6028	90.6534	5270	17	5266	21	0	0.0000
astatham-gatk	SNP	ti	func_cds	homalt	99.9526	99.9052	100.0000	19.7136	5270	5	5270	0	0
ltrigg-rtg2	SNP	ti	func_cds	homalt	99.9526	99.9052	100.0000	20.2844	5270	5	5270	0	0
asubramanian-gatk	SNP	ti	map_l150_m2_e0	*	40.8545	25.6874	99.7538	94.2642	5269	15243	5267	13	5	38.4615
raldana-dualsentieon	SNP	tv	segdup	het	99.3773	99.6595	99.0966	91.7904	5269	18	5265	48	0	0.0000
qzeng-custom	SNP	ti	func_cds	homalt	99.8860	99.8673	99.9047	18.9998	5268	7	5243	5	3	60.0000
ciseli-custom	SNP	ti	func_cds	homalt	99.3195	99.8483	98.7963	20.7719	5267	8	5253	64	29	45.3125
gduggal-bwafb	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	92.4416	88.7728	96.4267	49.8323	5266	666	3751	139	127	91.3669
mlin-fermikit	INDEL	D6_15	*	hetalt	78.2531	64.4238	99.6427	35.0794	5266	2908	5298	19	18	94.7368
mlin-fermikit	SNP	ti	func_cds	homalt	99.5745	99.8294	99.3210	18.8179	5266	9	5266	36	34	94.4444
ckim-gatk	SNP	ti	func_cds	homalt	99.9051	99.8104	100.0000	20.1183	5265	10	5265	0	0
rpoplin-dv42	SNP	tv	segdup	het	99.6497	99.5839	99.7157	91.3241	5265	22	5261	15	0	0.0000
jmaeng-gatk	SNP	ti	func_cds	homalt	99.9051	99.8104	100.0000	20.1062	5265	10	5265	0	0
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	88.0249	90.0274	86.1096	53.5183	5263	583	4761	768	648	84.3750
ckim-isaac	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	88.0249	90.0274	86.1096	53.5183	5263	583	4761	768	648	84.3750
ckim-vqsr	SNP	*	map_l150_m0_e0	*	60.5419	43.7334	98.3368	94.2598	5262	6770	5262	89	0	0.0000
ckim-gatk	SNP	tv	segdup	het	98.3440	99.4704	97.2428	95.8012	5259	28	5255	149	0	0.0000
egarrison-hhga	SNP	tv	segdup	het	99.4044	99.4326	99.3762	90.4305	5257	30	5257	33	2	6.0606
ghariani-varprowl	SNP	tv	segdup	het	95.9597	99.4326	92.7212	94.3028	5257	30	5261	413	3	0.7264
ltrigg-rtg2	SNP	tv	segdup	het	98.5667	99.4137	97.7340	87.6779	5256	31	5262	122	2	1.6393
ciseli-custom	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	76.2662	86.5448	68.1700	55.3642	5255	817	5230	2442	2103	86.1179
jmaeng-gatk	SNP	tv	segdup	het	97.3848	99.3758	95.4719	95.8451	5254	33	5250	249	0	0.0000
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	98.2699	96.6164	99.9810	27.1104	5254	184	5266	1	0	0.0000
ndellapenna-hhga	SNP	tv	segdup	het	99.3381	99.3569	99.3193	90.2972	5253	34	5253	36	2	5.5556
ckim-vqsr	SNP	ti	func_cds	homalt	99.7910	99.5829	100.0000	20.1550	5253	22	5253	0	0
ltrigg-rtg1	SNP	tv	segdup	het	98.5379	99.3380	97.7505	88.6829	5252	35	5258	121	1	0.8264
gduggal-snapfb	SNP	tv	segdup	het	98.0225	99.3191	96.7593	93.1540	5251	36	5255	176	3	1.7046
gduggal-snapplat	SNP	ti	func_cds	homalt	99.7435	99.5071	99.9810	20.2128	5249	26	5249	1	1	100.0000
gduggal-bwafb	SNP	tv	segdup	het	98.1577	99.2623	97.0773	93.8623	5248	39	5248	158	6	3.7975
gduggal-bwaplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	83.6479	73.1252	97.7082	43.0315	5246	1928	5244	123	121	98.3740
mlin-fermikit	INDEL	D6_15	HG002compoundhet	hetalt	78.2401	64.3602	99.7528	23.4532	5246	2905	5245	13	13	100.0000
asubramanian-gatk	SNP	ti	func_cds	homalt	99.7244	99.4502	100.0000	20.1522	5246	29	5246	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.9829	96.4509	99.5644	27.1624	5245	193	5257	23	22	95.6522
eyeh-varpipe	INDEL	I6_15	*	homalt	77.6886	84.0359	72.2329	34.4939	5243	996	5273	2027	2012	99.2600
astatham-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.9353	96.3590	99.5640	26.8986	5240	198	5252	23	22	95.6522
gduggal-bwaplat	SNP	ti	func_cds	homalt	99.6481	99.2986	100.0000	20.6003	5238	37	5238	0	0
gduggal-snapvard	SNP	ti	func_cds	homalt	99.6385	99.2986	99.9808	20.4816	5238	37	5217	1	1	100.0000
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	74.5911	64.9460	87.6005	39.3454	5234	2825	763	108	107	99.0741

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