PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
84051-84100 / 86044 show all
jmaeng-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvmap_l250_m1_e0hetalt
0.0000
100.0000
04000
jmaeng-gatkSNPtvsegdupwithalt*
0.0000
100.0000
00000
jmaeng-gatkSNPtvsegdupwithalthet
0.0000
100.0000
00000
jmaeng-gatkSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDEL*decoyhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDEL*func_cdshetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
016000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jpowers-varprowlINDEL*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
0125000
jpowers-varprowlINDEL*map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
033000
jpowers-varprowlINDEL*map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
011000
jpowers-varprowlINDEL*map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
040000
jpowers-varprowlINDEL*map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
042000