PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1673 1674 1675 1676 1677 1678 1679 1680 1681 ... 1720 1721 » 83801-83850 / 86044 show all
jpowers-varprowl	INDEL	I6_15	map_l250_m0_e0	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	map_l250_m0_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	map_l250_m1_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	map_l250_m2_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	map_l250_m2_e1	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	segdup	hetalt	0.0000	0.0000	0.0000	0	45	0	0	0
jpowers-varprowl	INDEL	I6_15	segdupwithalt	*	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	segdupwithalt	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	segdupwithalt	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	segdupwithalt	homalt	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	INDEL	I6_15	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	3	0	0	0
jpowers-varprowl	SNP	*	*	hetalt	0.0000	0.0000	0.0000	0	871	0	0	0
jpowers-varprowl	SNP	*	HG002complexvar	hetalt	0.0000	0.0000	0.0000	0	310	0	0	0
jpowers-varprowl	SNP	*	HG002compoundhet	hetalt	0.0000	0.0000	0.0000	0	862	0	0	0
jpowers-varprowl	SNP	*	decoy	*	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	decoy	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	decoy	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	decoy	homalt	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	func_cds	hetalt	0.0000	0.0000	0.0000	0	10	0	0	0
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	13	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.0000	0.0000	0	15	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	2	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	3	0	0	0
jpowers-varprowl	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	0.0000	0.0000	0	15	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.0000	0.0000	0	1	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	0.0000	0.0000	0	5	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_gt10	*	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_gt10	het	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	0.0000		100.0000	0	0	0	0	0
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	0.0000	0.0000	0	5	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge