PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1567 1568 1569 1570 1571 1572 1573 1574 1575 ... 1720 1721 » 78501-78550 / 86044 show all
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	0.0000	100.0000	50.0000	0	2	1	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	25.0000	0	0	0	3	2	66.6667
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	*	0.0000	0.0000	33.3333	94.7368	0	0	1	2	2	100.0000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	0.0000	0.0000	100.0000	96.4286	0	0	1	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000	0.0000	90.4762	0	0	0	2	2	100.0000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*	0.0000	0.0000	25.0000	69.2308	0	26	2	6	5	83.3333
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het		0.0000	0.0000	90.0000	0	3	0	1	1	100.0000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	0.0000	0.0000	100.0000	81.8182	0	23	2	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	5	4	80.0000
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*		0.0000	0.0000	0.0000	0	4	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het		0.0000	0.0000	0.0000	0	2	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l100_m1_e0	hetalt		0.0000		100.0000	0	3	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l100_m2_e0	hetalt		0.0000		100.0000	0	3	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l100_m2_e1	hetalt		0.0000		100.0000	0	3	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l125_m0_e0	het	0.0000	0.0000	100.0000	81.8182	0	3	2	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	3	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l150_m0_e0	het	0.0000	0.0000	100.0000	87.5000	0	2	1	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m0_e0	*		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m0_e0	het		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m1_e0	*		0.0000		100.0000	0	1	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m1_e0	het		0.0000		100.0000	0	1	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m2_e0	*		0.0000		100.0000	0	1	0	0	0
eyeh-varpipe	INDEL	I16_PLUS	map_l250_m2_e0	het		0.0000		100.0000	0	1	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge