PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
50701-50750 / 86044 show all
cchapple-customINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
76.4641
66.6667
89.6373
96.7233
21346405
12.5000
cchapple-customINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.0392
20200
cchapple-customINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
99.5012
22200
cchapple-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
66.6667
50.0000
100.0000
99.4911
22200
cchapple-customINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
96.0000
20200
cchapple-customINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9733
20200
cchapple-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3174
20200
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3007
20200
cchapple-customINDELD1_5map_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD1_5tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15func_cdshetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.8085
20300
cchapple-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
88.8889
20200
cchapple-customINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7742
20200
cchapple-customINDELD6_15map_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15map_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELD6_15map_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
87.5000
20200
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
57.1429
50.0000
66.6667
91.1765
22210
0.0000
cchapple-customINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
98.2759
20200
cchapple-customINDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.0769
20200
cchapple-customINDELI16_PLUSmap_l150_m0_e0het
88.8889
100.0000
80.0000
96.1538
20410
0.0000
cchapple-customINDELI16_PLUSmap_l150_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l150_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUSmap_l150_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
71.4286
20200
cchapple-customINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
71.4286
20200
astatham-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.0291
20200
astatham-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1111
20200
astatham-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.1031
20200
astatham-gatkINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.7011
20200
astatham-gatkINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9567
20200
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3730
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
astatham-gatkINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
astatham-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
astatham-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
astatham-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
20200
astatham-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3471
20200
astatham-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
astatham-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.5926
20200
astatham-gatkINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.4026
20200
astatham-gatkINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.9184
20200
astatham-gatkINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.7213
20200
astatham-gatkINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.8254
20200
astatham-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
86.6667
20200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.1034
22200