PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
50301-50350 / 86044 show all
mlin-fermikitINDELI6_15map_l150_m2_e0hetalt
80.0000
66.6667
100.0000
88.2353
21200
mlin-fermikitINDELI6_15map_l150_m2_e1hetalt
80.0000
66.6667
100.0000
89.4737
21200
mlin-fermikitINDELI6_15map_l250_m1_e0*
40.0000
28.5714
66.6667
96.1039
25211
100.0000
mlin-fermikitINDELI6_15map_l250_m2_e0het
57.1429
40.0000
100.0000
95.3488
23200
mlin-fermikitINDELI6_15map_l250_m2_e1het
57.1429
40.0000
100.0000
95.4545
23200
mlin-fermikitINDELI6_15tech_badpromotershetalt
80.0000
66.6667
100.0000
60.0000
21200
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
mlin-fermikitSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.2353
20200
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
mlin-fermikitSNPtimap_l100_m0_e0hetalt
25.0000
14.2857
100.0000
80.0000
212200
mlin-fermikitSNPtisegduphetalt
100.0000
100.0000
100.0000
96.7213
20200
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
mlin-fermikitSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
ndellapenna-hhgaINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
80.0000
66.6667
100.0000
98.9899
21100
ndellapenna-hhgaINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
57.1429
40.0000
100.0000
99.8219
23200
ndellapenna-hhgaINDELI16_PLUSmap_l100_m1_e0homalt
50.0000
40.0000
66.6667
94.3396
23210
0.0000
ndellapenna-hhgaINDELI16_PLUSmap_l100_m2_e0homalt
50.0000
40.0000
66.6667
95.6522
23210
0.0000
ndellapenna-hhgaINDELI16_PLUSmap_l100_m2_e1homalt
50.0000
40.0000
66.6667
95.6522
23210
0.0000
ndellapenna-hhgaINDELI16_PLUSmap_l125_m0_e0het
66.6667
66.6667
66.6667
92.3077
21210
0.0000
ndellapenna-hhgaINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
88.8889
20210
0.0000
ndellapenna-hhgaINDELI16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
71.4286
20200
ndellapenna-hhgaINDELI16_PLUSmap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
71.4286
20200
ndellapenna-hhgaINDELI16_PLUSmap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
71.4286
20200
ndellapenna-hhgaINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
60.0000
20200
ndellapenna-hhgaINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
ndellapenna-hhgaINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
ndellapenna-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
50.0000
100.0000
33.3333
78.5714
20120
0.0000
ndellapenna-hhgaINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.4000
20200
ndellapenna-hhgaINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.7421
20200
ndellapenna-hhgaINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7730
20200
ndellapenna-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
ndellapenna-hhgaSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
ndellapenna-hhgaSNP*map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
95.4545
22200
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.7368
20200
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
81.8182
20200
ndellapenna-hhgaSNPtimap_l250_m1_e0hetalt
66.6667
50.0000
100.0000
93.1034
22200
ndellapenna-hhgaSNPtisegduphetalt
100.0000
100.0000
100.0000
99.0698
20200
ndellapenna-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
ndellapenna-hhgaSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
81.8182
20200
ndellapenna-hhgaSNPtvmap_l250_m1_e0hetalt
66.6667
50.0000
100.0000
95.4545
22200
qzeng-customINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
66.6667
100.0000
21000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
66.6667
100.0000
21000
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.5964
22400
qzeng-customINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
98.1481
20210
0.0000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.6552
20300
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.7778
20200
ltrigg-rtg2SNPtimap_l250_m1_e0hetalt
66.6667
50.0000
100.0000
81.8182
22200
ltrigg-rtg2SNPtisegduphetalt
100.0000
100.0000
100.0000
98.6667
20200
ltrigg-rtg2SNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
72.7273
20300