PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
50151-50200 / 86044 show all
hfeng-pmm2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
80.0000
100.0000
66.6667
98.2249
20210
0.0000
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
80.0000
100.0000
66.6667
98.2143
20210
0.0000
hfeng-pmm2INDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
97.1831
20200
hfeng-pmm2INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9544
20200
hfeng-pmm2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2727
20200
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2481
20200
hfeng-pmm2INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.1308
20200
hfeng-pmm2INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
hfeng-pmm2INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm2INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
hfeng-pmm2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9381
20200
hfeng-pmm2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
hfeng-pmm2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.3043
20200
hfeng-pmm2INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.0149
20200
hfeng-pmm2INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.7447
20200
hfeng-pmm2INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.6102
20200
hfeng-pmm2INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.6667
20200
hfeng-pmm2INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
89.4737
20200
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
66.6667
100.0000
21000
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
66.6667
50.0000
100.0000
85.7143
22200
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm2INDELI16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
98.4962
20200
hfeng-pmm2INDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
93.3333
21200
hfeng-pmm2INDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
94.4444
21200
hfeng-pmm2INDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
94.5946
21200
hfeng-pmm2INDELI16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
98.3193
20200
hfeng-pmm2INDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
90.4762
21200
hfeng-pmm2INDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
92.3077
21200
hfeng-pmm2INDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
92.3077
21200
hfeng-pmm2INDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
97.3913
20210
0.0000
hfeng-pmm2INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
71.4286
20200
hfeng-pmm2INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
hfeng-pmm2INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
hfeng-pmm2INDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
87.5000
20210
0.0000
hfeng-pmm2INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
hfeng-pmm2INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.4962
20200
hfeng-pmm2INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.5185
20200
hfeng-pmm2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8596
20200
hfeng-pmm2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.4318
20200
hfeng-pmm2INDELI6_15map_l250_m1_e0het
57.1429
50.0000
66.6667
98.1250
22211
100.0000
hfeng-pmm2INDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.4026
21200
hfeng-pmm2INDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.6190
21200
hfeng-pmm2INDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
97.7273
21200
hfeng-pmm2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
hfeng-pmm2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
qzeng-customINDELI6_15map_l150_m0_e0*
36.3636
25.0000
66.6667
96.8750
261051
20.0000
qzeng-customINDELI6_15map_l250_m1_e0het
53.3333
50.0000
57.1429
98.2544
22431
33.3333
qzeng-customINDELI6_15tech_badpromotershomalt
66.6667
66.6667
66.6667
57.1429
21211
100.0000
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
20200
qzeng-customSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
85.7143
20200