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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 982 983 984 985 986 987 988 989 990 ... 1720 1721 » 49251-49300 / 86044 show all
gduggal-bwafb	INDEL	D6_15	map_l150_m1_e0	het	96.3702	94.8718	97.9167	89.0411	37	2	47	1	0	0.0000
gduggal-bwafb	INDEL	I1_5	map_l100_m2_e1	hetalt	90.2439	82.2222	100.0000	93.0723	37	8	23	0	0
gduggal-bwafb	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	86.0465	90.2439	82.2222	92.8458	37	4	37	8	6	75.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt	84.0909	72.5490	100.0000	39.3443	37	14	37	0	0
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	37.7551	27.4074	60.6557	81.1728	37	98	37	24	4	16.6667
gduggal-bwaplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	86.0465	75.5102	100.0000	26.0000	37	12	37	0	0
gduggal-bwaplat	INDEL	D1_5	map_l150_m0_e0	homalt	60.6557	43.5294	100.0000	95.6057	37	48	37	0	0
jmaeng-gatk	INDEL	D16_PLUS	segdup	het	93.3333	100.0000	87.5000	97.4260	37	0	35	5	2	40.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	98.6667	100.0000	97.3684	80.0000	37	0	37	1	0	0.0000
jmaeng-gatk	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	93.6709	88.0952	100.0000	97.5610	37	5	37	0	0
jli-custom	INDEL	D16_PLUS	segdup	het	97.2222	100.0000	94.5946	95.3224	37	0	35	2	1	50.0000
jpowers-varprowl	INDEL	I16_PLUS	map_siren	*	50.3401	43.0233	60.6557	78.9655	37	49	37	24	24	100.0000
jpowers-varprowl	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	80.4348	88.0952	74.0000	97.4937	37	5	37	13	0	0.0000
jmaeng-gatk	INDEL	*	map_l125_m2_e0	hetalt	93.6709	88.0952	100.0000	93.7710	37	5	37	0	0
jmaeng-gatk	INDEL	*	map_l125_m2_e1	hetalt	92.5000	86.0465	100.0000	93.8742	37	6	37	0	0
ltrigg-rtg1	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	92.3981	88.0952	97.1429	87.9310	37	5	34	1	0	0.0000
ltrigg-rtg2	INDEL	*	map_l125_m2_e0	hetalt	93.6709	88.0952	100.0000	95.5429	37	5	39	0	0
ltrigg-rtg2	INDEL	*	map_l125_m2_e1	hetalt	92.5000	86.0465	100.0000	95.5982	37	6	39	0	0
ltrigg-rtg1	INDEL	*	map_l125_m2_e0	hetalt	93.6709	88.0952	100.0000	95.2670	37	5	39	0	0
ltrigg-rtg1	INDEL	*	map_l125_m2_e1	hetalt	92.5000	86.0465	100.0000	95.3349	37	6	39	0	0
jpowers-varprowl	INDEL	D16_PLUS	map_l100_m1_e0	het	70.4762	80.4348	62.7119	95.1199	37	9	37	22	19	86.3636
rpoplin-dv42	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het	92.5000	88.0952	97.3684	99.3838	37	5	37	1	1	100.0000
raldana-dualsentieon	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	60.2151	37	0	37	0	0
raldana-dualsentieon	INDEL	D6_15	map_l125_m2_e1	homalt	100.0000	100.0000	100.0000	87.0629	37	0	37	0	0
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	85.0575	80.4348	90.2439	53.9326	37	9	37	4	4	100.0000
rpoplin-dv42	INDEL	D16_PLUS	segdup	het	96.1039	100.0000	92.5000	93.3775	37	0	37	3	3	100.0000
qzeng-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	80.2168	80.4348	80.0000	57.3643	37	9	44	11	6	54.5455
qzeng-custom	INDEL	D16_PLUS	segdup	het	76.6355	100.0000	62.1212	94.9309	37	0	41	25	5	20.0000
qzeng-custom	INDEL	D6_15	map_l125_m0_e0	*	80.3712	78.7234	82.0896	94.0603	37	10	55	12	2	16.6667
qzeng-custom	INDEL	D6_15	map_l150_m2_e0	het	83.3884	80.4348	86.5672	94.7368	37	9	58	9	3	33.3333
qzeng-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	het	77.9185	72.5490	84.1463	86.5132	37	14	69	13	7	53.8462
qzeng-custom	SNP	tv	tech_badpromoters	homalt	96.0692	94.8718	97.2973	51.3158	37	2	36	1	1	100.0000
ndellapenna-hhga	INDEL	D16_PLUS	segdup	het	96.2025	100.0000	92.6829	93.1667	37	0	38	3	1	33.3333
ndellapenna-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	80.4348	67.2727	100.0000	66.6667	37	18	36	0	0
mlin-fermikit	INDEL	D1_5	map_l250_m2_e0	homalt	66.6667	61.6667	72.5490	90.0391	37	23	37	14	14	100.0000
mlin-fermikit	INDEL	D1_5	map_l250_m2_e1	homalt	66.6667	61.6667	72.5490	90.4315	37	23	37	14	14	100.0000
mlin-fermikit	INDEL	D6_15	map_l100_m0_e0	het	65.7317	61.6667	70.3704	79.5455	37	23	38	16	9	56.2500
mlin-fermikit	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	70.4762	90.2439	57.8125	92.6606	37	4	37	27	26	96.2963
mlin-fermikit	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	71.1538	90.2439	58.7302	92.5969	37	4	37	26	19	73.0769
ndellapenna-hhga	SNP	*	map_l100_m2_e1	hetalt	91.3580	86.0465	97.3684	79.4595	37	6	37	1	1	100.0000
ndellapenna-hhga	SNP	tv	map_l100_m2_e1	hetalt	91.3580	86.0465	97.3684	79.4595	37	6	37	1	1	100.0000
qzeng-custom	INDEL	*	tech_badpromoters	het	95.0546	94.8718	95.2381	45.4545	37	2	40	2	1	50.0000
astatham-gatk	INDEL	D16_PLUS	segdup	het	87.5000	100.0000	77.7778	96.5170	37	0	35	10	2	20.0000
astatham-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	100.0000	100.0000	100.0000	78.8889	37	0	38	0	0
asubramanian-gatk	INDEL	*	map_l125_m1_e0	hetalt	96.1039	92.5000	100.0000	93.3333	37	3	37	0	0
bgallagher-sentieon	INDEL	D16_PLUS	segdup	het	90.9091	100.0000	83.3333	96.5742	37	0	35	7	2	28.5714
anovak-vg	INDEL	D1_5	map_l250_m2_e0	homalt	74.7056	61.6667	94.7368	96.3844	37	23	36	2	2	100.0000
anovak-vg	INDEL	D1_5	map_l250_m2_e1	homalt	74.7056	61.6667	94.7368	96.4912	37	23	36	2	2	100.0000
anovak-vg	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*	15.5475	9.5361	42.0635	45.6897	37	351	53	73	43	58.9041
asubramanian-gatk	INDEL	D16_PLUS	segdup	het	93.3333	100.0000	87.5000	97.2640	37	0	35	5	2	40.0000

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