PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
351-400 / 86044 show all | |||||||||||||||
| anovak-vg | INDEL | C1_5 | map_l150_m0_e0 | het | 0.0000 | 0.0000 | 50.0000 | 97.4359 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_l150_m1_e0 | * | 0.0000 | 0.0000 | 60.0000 | 97.1591 | 0 | 0 | 3 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m1_e0 | het | 0.0000 | 0.0000 | 50.0000 | 97.4194 | 0 | 0 | 2 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.2381 | 0 | 0 | 1 | 0 | 0 | ||
| anovak-vg | INDEL | C1_5 | map_l150_m2_e0 | * | 0.0000 | 0.0000 | 60.0000 | 97.3958 | 0 | 0 | 3 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m2_e0 | het | 0.0000 | 0.0000 | 50.0000 | 97.6471 | 0 | 0 | 2 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.4545 | 0 | 0 | 1 | 0 | 0 | ||
| anovak-vg | INDEL | C1_5 | map_l150_m2_e1 | * | 0.0000 | 0.0000 | 60.0000 | 97.4093 | 0 | 0 | 3 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m2_e1 | het | 0.0000 | 0.0000 | 50.0000 | 97.6608 | 0 | 0 | 2 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.4545 | 0 | 0 | 1 | 0 | 0 | ||
| anovak-vg | INDEL | C1_5 | map_l250_m0_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_l250_m1_e0 | * | 0.0000 | 0.0000 | 50.0000 | 98.1481 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l250_m1_e0 | het | 0.0000 | 0.0000 | 50.0000 | 98.0392 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l250_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_l250_m2_e0 | * | 0.0000 | 0.0000 | 50.0000 | 98.4496 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l250_m2_e0 | het | 0.0000 | 0.0000 | 50.0000 | 98.3193 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l250_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_l250_m2_e1 | * | 0.0000 | 0.0000 | 50.0000 | 98.4615 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l250_m2_e1 | het | 0.0000 | 0.0000 | 50.0000 | 98.3333 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_l250_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_l250_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | map_siren | * | 0.0000 | 0.0000 | 38.4615 | 96.4187 | 0 | 0 | 5 | 8 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_siren | het | 0.0000 | 0.0000 | 33.3333 | 95.9322 | 0 | 0 | 4 | 8 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | map_siren | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 98.5294 | 0 | 0 | 1 | 0 | 0 | ||
| anovak-vg | INDEL | C1_5 | segdup | * | 0.0000 | 0.0000 | 60.0000 | 99.0619 | 0 | 0 | 3 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | segdup | het | 0.0000 | 0.0000 | 60.0000 | 98.8610 | 0 | 0 | 3 | 2 | 0 | 0.0000 | |
| anovak-vg | INDEL | C1_5 | segdup | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | segdup | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | segdupwithalt | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| anovak-vg | INDEL | C1_5 | tech_badpromoters | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | tech_badpromoters | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C1_5 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C6_15 | * | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| anovak-vg | INDEL | C6_15 | * | homalt | 0.0000 | 0.0000 | 100.0000 | 97.7528 | 0 | 0 | 2 | 0 | 0 | ||
| anovak-vg | INDEL | C6_15 | HG002complexvar | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||