PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
36601-36650 / 86044 show all
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3730
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
astatham-gatkINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
astatham-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
astatham-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
astatham-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
20200
astatham-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3471
20200
astatham-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
astatham-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.5926
20200
astatham-gatkINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.4026
20200
astatham-gatkINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.9184
20200
astatham-gatkINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.7213
20200
astatham-gatkINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.8254
20200
astatham-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
86.6667
20200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.1034
22200
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
40.0000
20300
astatham-gatkINDELI16_PLUSmap_l100_m0_e0homalt
80.0000
100.0000
66.6667
98.2558
20210
0.0000
astatham-gatkINDELI16_PLUSmap_l100_m1_e0hetalt
80.0000
66.6667
100.0000
92.3077
21200
astatham-gatkINDELI16_PLUSmap_l100_m2_e0hetalt
80.0000
66.6667
100.0000
93.9394
21200
astatham-gatkINDELI16_PLUSmap_l100_m2_e1hetalt
80.0000
66.6667
100.0000
94.1176
21200
astatham-gatkINDELI16_PLUSmap_l125_m0_e0homalt
80.0000
100.0000
66.6667
98.0132
20210
0.0000
astatham-gatkINDELI16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
88.8889
21200
astatham-gatkINDELI16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
90.9091
21200
astatham-gatkINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
90.9091
21200
astatham-gatkINDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
97.7273
20210
0.0000
astatham-gatkINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
astatham-gatkINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
astatham-gatkINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
91.6667
20210
0.0000
astatham-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.9798
20200
astatham-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.3871
20200
astatham-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.4127
20200
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8644
20200
astatham-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3921
20200
astatham-gatkINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.7778
21200
astatham-gatkINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.9167
21200
astatham-gatkINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
98.0392
21200
astatham-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
astatham-gatkSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
astatham-gatkSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
97.3333
20200
astatham-gatkSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.0000
20200
astatham-gatkSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
astatham-gatkSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
96.7742
20200
astatham-gatkSNPtisegduphetalt
100.0000
100.0000
100.0000
98.5294
20200
astatham-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
astatham-gatkSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8495
20200
asubramanian-gatkINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
66.6667
0.0000
75.5627
2103040
0.0000
asubramanian-gatkINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
66.6667
0.0000
75.7212
2102020
0.0000
asubramanian-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.1304
20200