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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 721 722 723 724 725 726 727 728 729 ... 1720 1721 » 36201-36250 / 86044 show all
raldana-dualsentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	91.6667	2	0	2	0	0
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	77.7778	2	0	2	0	0
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	95.1220	2	0	2	0	0
raldana-dualsentieon	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	98.3333	2	0	2	0	0
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.9091	2	0	2	0	0
raldana-dualsentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
rpoplin-dv42	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	80.0000	66.6667	100.0000	98.4848	2	1	2	0	0
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	80.0000	66.6667	100.0000	98.3051	2	1	2	0	0
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	66.6667	66.6667	66.6667	99.5208	2	1	2	1	1	100.0000
rpoplin-dv42	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	80.0000	100.0000	66.6667	96.7742	2	0	2	1	1	100.0000
rpoplin-dv42	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*		66.6667		100.0000	2	1	0	0	0
rpoplin-dv42	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het		66.6667		100.0000	2	1	0	0	0
rpoplin-dv42	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	98.0952	2	0	2	0	0
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	57.1429	50.0000	66.6667	97.9021	2	2	2	1	1	100.0000
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	57.1429	50.0000	66.6667	97.8102	2	2	2	1	1	100.0000
rpoplin-dv42	INDEL	D16_PLUS	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	96.2963	2	0	2	0	0
rpoplin-dv42	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	86.6667	2	0	2	0	0
egarrison-hhga	INDEL	C1_5	HG002complexvar	*		28.5714		100.0000	2	5	0	0	0
egarrison-hhga	INDEL	C1_5	HG002complexvar	het		28.5714		100.0000	2	5	0	0	0
egarrison-hhga	INDEL	D16_PLUS	decoy	homalt	100.0000	100.0000	100.0000	97.8261	2	0	2	0	0
egarrison-hhga	INDEL	D16_PLUS	map_l100_m0_e0	hetalt	57.1429	50.0000	66.6667	85.0000	2	2	2	1	0	0.0000
egarrison-hhga	INDEL	D16_PLUS	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	95.1220	2	0	2	0	0
egarrison-hhga	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9511	2	0	2	0	0
egarrison-hhga	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.6117	2	0	2	0	0
egarrison-hhga	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.6008	2	0	2	0	0
egarrison-hhga	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	97.8261	2	0	2	0	0
egarrison-hhga	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.4026	2	0	4	0	0
egarrison-hhga	INDEL	D6_15	map_l150_m0_e0	hetalt	57.1429	40.0000	100.0000	96.4286	2	3	1	0	0
egarrison-hhga	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
egarrison-hhga	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	86.6667	2	0	2	0	0
egarrison-hhga	INDEL	I16_PLUS	map_l100_m1_e0	homalt	50.0000	40.0000	66.6667	92.6829	2	3	2	1	0	0.0000
egarrison-hhga	INDEL	I16_PLUS	map_l100_m2_e0	homalt	50.0000	40.0000	66.6667	94.6429	2	3	2	1	0	0.0000
egarrison-hhga	INDEL	I16_PLUS	map_l100_m2_e1	homalt	50.0000	40.0000	66.6667	94.6429	2	3	2	1	0	0.0000
egarrison-hhga	INDEL	I16_PLUS	map_l125_m0_e0	het	66.6667	66.6667	66.6667	91.8919	2	1	2	1	0	0.0000
egarrison-hhga	INDEL	I16_PLUS	map_l150_m0_e0	het	80.0000	100.0000	66.6667	88.8889	2	0	2	1	0	0.0000
egarrison-hhga	INDEL	I16_PLUS	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
egarrison-hhga	INDEL	I16_PLUS	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
egarrison-hhga	INDEL	I16_PLUS	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
egarrison-hhga	INDEL	I16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
egarrison-hhga	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	50.0000	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	50.0000	100.0000	33.3333	82.3529	2	0	1	2	0	0.0000
egarrison-hhga	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.3051	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.6667	2	0	2	0	0
egarrison-hhga	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.6842	2	0	2	0	0
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8241	2	0	2	0	0
egarrison-hhga	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.1489	2	0	2	0	0
egarrison-hhga	INDEL	I6_15	map_l150_m0_e0	het	66.6667	50.0000	100.0000	98.1132	2	2	2	0	0
egarrison-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	86.6667	2	0	2	0	0

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