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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 713 714 715 716 717 718 719 720 721 ... 1720 1721 » 35801-35850 / 86044 show all
gduggal-snapvard	INDEL	I16_PLUS	map_l150_m2_e1	*	30.1075	18.1818	87.5000	88.7324	2	9	7	1	1	100.0000
gduggal-snapvard	INDEL	I16_PLUS	map_l150_m2_e1	het	48.2759	33.3333	87.5000	88.7324	2	4	7	1	1	100.0000
gduggal-snapvard	INDEL	I16_PLUS	map_siren	*	4.4800	2.3256	60.8696	78.5047	2	84	28	18	12	66.6667
gduggal-snapvard	INDEL	I16_PLUS	map_siren	het	7.6607	4.0816	62.2222	78.3654	2	47	28	17	11	64.7059
gduggal-snapvard	INDEL	I16_PLUS	segdup	*	7.7994	4.2553	46.6667	93.6170	2	45	7	8	7	87.5000
gduggal-snapvard	INDEL	I16_PLUS	segdup	het	14.1414	8.3333	46.6667	93.3628	2	22	7	8	7	87.5000
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	73.6842	100.0000	58.3333	83.5616	2	0	7	5	4	80.0000
gduggal-snapvard	INDEL	I1_5	map_l125_m0_e0	hetalt	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
gduggal-snapvard	INDEL	I6_15	map_l100_m0_e0	hetalt	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
gduggal-snapvard	INDEL	I6_15	map_l150_m1_e0	hetalt	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
gduggal-snapvard	INDEL	I6_15	map_l150_m1_e0	homalt	44.4444	28.5714	100.0000	86.9565	2	5	6	0	0
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e0	hetalt	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e0	homalt	44.4444	28.5714	100.0000	88.0000	2	5	6	0	0
gduggal-snapvard	INDEL	I6_15	map_l150_m2_e1	hetalt	0.0000	66.6667	0.0000	0.0000	2	1	0	0	0
gduggal-snapvard	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	98.9796	2	0	1	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	98.7500	2	0	1	0	0
gduggal-snapfb	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	28.5714	66.6667	18.1818	83.2061	2	1	4	18	5	27.7778
gduggal-snapfb	INDEL	C1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	34.7826	66.6667	23.5294	77.0270	2	1	4	13	3	23.0769
gduggal-snapfb	INDEL	D16_PLUS	HG002compoundhet	*	0.1707	0.0854	100.0000	0.0000	2	2339	1	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	0.1123	0.0562	100.0000	0.0000	2	3559	1	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	0.0800	0.0400	100.0000	0.0000	2	4997	1	0	0
gduggal-snapfb	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	0.0800	0.0400	100.0000	0.0000	2	4997	1	0	0
gduggal-snapfb	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9690	2	0	2	0	0
gduggal-snapfb	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.6805	2	0	2	0	0
gduggal-snapfb	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.6678	2	0	2	0	0
gduggal-snapfb	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
gduggal-snapfb	INDEL	D1_5	map_l250_m1_e0	hetalt	80.0000	66.6667	100.0000	97.5000	2	1	2	0	0
gduggal-snapfb	INDEL	D1_5	map_l250_m2_e0	hetalt	80.0000	66.6667	100.0000	97.8261	2	1	2	0	0
gduggal-snapfb	INDEL	D1_5	map_l250_m2_e1	hetalt	80.0000	66.6667	100.0000	97.8947	2	1	2	0	0
gduggal-snapfb	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	50.0000	33.3333	100.0000	97.4684	2	4	2	0	0
gduggal-snapfb	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	80.0000	66.6667	100.0000	95.5556	2	1	2	0	0
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	97.4684	2	2	2	0	0
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	95.5556	2	0	2	0	0
gduggal-snapfb	INDEL	D6_15	map_l250_m0_e0	het	66.6667	50.0000	100.0000	96.4912	2	2	2	0	0
gduggal-snapfb	INDEL	I16_PLUS	*	*	0.0000	0.0314	0.0000	0.0000	2	6375	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	*	het	0.0000	0.0736	0.0000	0.0000	2	2716	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	HG002complexvar	*	0.0000	0.1528	0.0000	0.0000	2	1307	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	HG002complexvar	het	0.0000	0.3008	0.0000	0.0000	2	663	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	0.0000	0.1307	0.0000	0.0000	2	1528	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	0.0000	0.3003	0.0000	0.0000	2	664	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	0.0000	0.1307	0.0000	0.0000	2	1528	0	0	0
gduggal-snapfb	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	0.0000	0.3003	0.0000	0.0000	2	664	0	0	0
gduggal-snapfb	INDEL	I1_5	func_cds	hetalt	0.0000	100.0000	0.0000	66.6667	2	0	0	1	1	100.0000
gduggal-snapfb	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.1132	2	0	2	0	0
gduggal-snapfb	INDEL	I1_5	map_l250_m2_e0	hetalt	66.6667	100.0000	50.0000	97.0149	2	0	2	2	0	0.0000
gduggal-snapfb	INDEL	I1_5	map_l250_m2_e1	hetalt	66.6667	100.0000	50.0000	97.0370	2	0	2	2	0	0.0000
gduggal-snapfb	INDEL	I6_15	func_cds	hetalt	50.0000	50.0000	50.0000	33.3333	2	2	1	1	1	100.0000
gduggal-snapplat	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9931	2	0	1	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	50.0000	33.3333	100.0000	98.5294	2	4	1	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	80.0000	66.6667	100.0000	97.9167	2	1	1	0	0

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