PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
35401-35450 / 86044 show all
ltrigg-rtg2INDELD16_PLUSmap_l250_m1_e0het
80.0000
66.6667
100.0000
95.5556
21200
ltrigg-rtg2INDELD16_PLUSmap_l250_m2_e0het
80.0000
66.6667
100.0000
96.2963
21200
ltrigg-rtg2INDELD16_PLUSmap_l250_m2_e1het
80.0000
66.6667
100.0000
96.4286
21200
ltrigg-rtg2INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.8616
20400
ltrigg-rtg2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2857
20200
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2806
20200
ltrigg-rtg2INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.6111
20200
ltrigg-rtg2INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
33.3333
20200
ltrigg-rtg2INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.0000
20200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8723
20200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
20200
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg2INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.7368
20200
ltrigg-rtg2INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.5517
20200
ltrigg-rtg2INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.9231
20200
ltrigg-rtg2INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9697
20200
ltrigg-rtg2INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg2INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
90.0000
22200
ltrigg-rtg2INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
80.0000
66.6667
100.0000
95.4545
21200
ltrigg-rtg2INDELI16_PLUSmap_l125_m0_e0het
66.6667
66.6667
66.6667
80.0000
21210
0.0000
ltrigg-rtg2INDELI16_PLUSmap_l125_m1_e0homalt
80.0000
66.6667
100.0000
84.6154
21200
ltrigg-rtg2INDELI16_PLUSmap_l125_m2_e0homalt
80.0000
66.6667
100.0000
88.8889
21200
ltrigg-rtg2INDELI16_PLUSmap_l125_m2_e1homalt
80.0000
66.6667
100.0000
88.8889
21200
ltrigg-rtg2INDELI16_PLUSmap_l150_m0_e0het
80.0000
100.0000
66.6667
75.0000
20210
0.0000
ltrigg-rtg2INDELI16_PLUSmap_l150_m1_e0homalt
80.0000
66.6667
100.0000
84.6154
21200
ltrigg-rtg2INDELI16_PLUSmap_l150_m2_e0homalt
80.0000
66.6667
100.0000
87.5000
21200
ltrigg-rtg2INDELI16_PLUSmap_l150_m2_e1homalt
80.0000
66.6667
100.0000
87.5000
21200
ltrigg-rtg2INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
85.0000
20210
0.0000
ltrigg-rtg2INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.9011
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0868
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0991
20200
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8529
20200
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.6721
20200
ltrigg-rtg2INDELI6_15map_l150_m0_e0het
66.6667
50.0000
100.0000
95.7447
22200
ltrigg-rtg2INDELI6_15map_l250_m1_e0het
66.6667
50.0000
100.0000
96.5517
22200
ltrigg-rtg2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
72.7273
20300
ltrigg-rtg2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
72.7273
20300
ltrigg-rtg2SNP*map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
88.8889
22200
mlin-fermikitINDELD1_5map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
92.8571
21200
mlin-fermikitINDELD1_5map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
95.0000
21200
mlin-fermikitINDELD1_5map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
95.3488
21200
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
98.0100
22222
100.0000
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
96.6667
20222
100.0000
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.6667
20200
mlin-fermikitINDELD6_15map_l125_m0_e0hetalt
44.4444
33.3333
66.6667
80.0000
24210
0.0000
mlin-fermikitINDELD6_15map_l250_m1_e0homalt
50.0000
40.0000
66.6667
96.1538
23211
100.0000