PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
3451-3500 / 86044 show all | |||||||||||||||
| qzeng-custom | INDEL | C1_5 | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | map_l250_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | map_siren | * | 0.0000 | 0.0000 | 80.0000 | 98.8318 | 0 | 0 | 8 | 2 | 1 | 50.0000 | |
| qzeng-custom | INDEL | C1_5 | map_siren | het | 0.0000 | 0.0000 | 75.0000 | 98.8604 | 0 | 0 | 6 | 2 | 1 | 50.0000 | |
| qzeng-custom | INDEL | C1_5 | map_siren | hetalt | 0.0000 | 0.0000 | 100.0000 | 95.0000 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | C1_5 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 99.2537 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | C1_5 | segdup | * | 0.0000 | 0.0000 | 57.1429 | 99.3671 | 0 | 0 | 4 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | C1_5 | segdup | het | 0.0000 | 0.0000 | 50.0000 | 99.3143 | 0 | 0 | 3 | 3 | 0 | 0.0000 | |
| qzeng-custom | INDEL | C1_5 | segdup | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 99.5025 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | C1_5 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | tech_badpromoters | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | tech_badpromoters | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C1_5 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C1_5 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C6_15 | * | hetalt | 0.0000 | 0.0000 | 100.0000 | 97.2603 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | * | homalt | 0.0000 | 0.0000 | 66.6667 | 95.9664 | 0 | 0 | 16 | 8 | 1 | 12.5000 | |
| qzeng-custom | INDEL | C6_15 | HG002complexvar | hetalt | 0.0000 | 0.0000 | 100.0000 | 91.6667 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | HG002complexvar | homalt | 0.0000 | 0.0000 | 80.0000 | 90.0498 | 0 | 0 | 16 | 4 | 1 | 25.0000 | |
| qzeng-custom | INDEL | C6_15 | HG002compoundhet | * | 0.0000 | 0.0000 | 41.1765 | 91.0526 | 0 | 0 | 7 | 10 | 1 | 10.0000 | |
| qzeng-custom | INDEL | C6_15 | HG002compoundhet | het | 0.0000 | 0.0000 | 45.4545 | 92.3611 | 0 | 0 | 5 | 6 | 0 | 0.0000 | |
| qzeng-custom | INDEL | C6_15 | HG002compoundhet | hetalt | 0.0000 | 0.0000 | 100.0000 | 90.4762 | 0 | 0 | 2 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | HG002compoundhet | homalt | 0.0000 | 0.0000 | 84.0000 | 0 | 0 | 0 | 4 | 1 | 25.0000 | ||
| qzeng-custom | INDEL | C6_15 | decoy | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | decoy | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | decoy | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | decoy | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | func_cds | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | func_cds | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C6_15 | func_cds | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| qzeng-custom | INDEL | C6_15 | func_cds | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 33.3333 | 97.2222 | 0 | 0 | 1 | 2 | 1 | 50.0000 | |
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 98.7805 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 100.0000 | 66.6667 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_51to200bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 95.6522 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 93.7500 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 91.6667 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_gt200bp_gt95identity_merged | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | hetalt | 0.0000 | 0.0000 | 100.0000 | 92.8571 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_AllRepeats_lt51bp_gt95identity_merged | homalt | 0.0000 | 0.0000 | 50.0000 | 97.5904 | 0 | 0 | 2 | 2 | 0 | 0.0000 | |
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | * | 0.0000 | 0.0000 | 61.1111 | 97.7070 | 0 | 0 | 11 | 7 | 1 | 14.2857 | |
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | het | 0.0000 | 0.0000 | 57.1429 | 97.6705 | 0 | 0 | 8 | 6 | 0 | 0.0000 | |
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | hetalt | 0.0000 | 0.0000 | 100.0000 | 95.8333 | 0 | 0 | 1 | 0 | 0 | ||
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331 | homalt | 0.0000 | 0.0000 | 66.6667 | 98.1250 | 0 | 0 | 2 | 1 | 1 | 100.0000 | |
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | * | 0.0000 | 0.0000 | 50.0000 | 95.2381 | 0 | 0 | 1 | 1 | 0 | 0.0000 | |
| qzeng-custom | INDEL | C6_15 | lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged | het | 0.0000 | 0.0000 | 96.8750 | 0 | 0 | 0 | 1 | 0 | 0.0000 | ||