PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
3101-3150 / 86044 show all
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*map_l125_m0_e0hetalt
0.0000
100.0000
09000
mlin-fermikitSNP*map_l150_m0_e0hetalt
0.0000
100.0000
03000
mlin-fermikitSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitSNP*map_l250_m1_e0hetalt
0.0000
100.0000
04000
mlin-fermikitSNP*map_l250_m2_e0hetalt
0.0000
100.0000
05000
mlin-fermikitSNP*map_l250_m2_e1hetalt
0.0000
100.0000
05000
mlin-fermikitSNP*segdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthet
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtidecoy*
0.0000
100.0000
00000
mlin-fermikitSNPtidecoyhet
0.0000
100.0000
00000
mlin-fermikitSNPtidecoyhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtidecoyhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000