PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
9301-9350 / 86044 show all
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
0.0000
0.0000
64.5833
0001530
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
0.0000
0.0000
64.4828
0001030
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
25.0000
00030
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
65.9420
000470
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
0.0000
71.5924
0002230
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
0.0000
73.0483
0001450
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
44.4444
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
0.0000
0.0000
69.3277
000730
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
0.0000
76.4158
0103040
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
0.0000
77.9412
0101950
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
66.6667
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
0.0000
73.3333
0001040
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
0.0000
69.8046
0001700
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50het
0.0000
0.0000
70.7692
0001140
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
66.6667
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
0.0000
67.6647
000540
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
66.6667
000120
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
80.0000
00050
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
36.3636
00070
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
71.4286
000180
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
74.2690
010880
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
75.6410
010570
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
80.0000
00010
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
70.8738
000300
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
82.5581
000300
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
88.0000
000150
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
71.4286
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
67.5000
000130
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
60.0000
000100
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
60.0000
00060
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
77.7778
00020
0.0000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
33.3333
00040
0.0000
asubramanian-gatkINDELC1_5map_l100_m0_e0*
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5map_l100_m0_e0het
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELC1_5map_l100_m0_e0homalt
0.0000
100.0000
00000
asubramanian-gatkINDELC1_5map_l100_m1_e0*
0.0000
0.0000
97.9592
00010
0.0000
asubramanian-gatkINDELC1_5map_l100_m1_e0het
0.0000
100.0000
00000