PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
8551-8600 / 86044 show all
jpowers-varprowlSNP*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlSNP*map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlSNP*map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlSNP*map_sirenhetalt
0.0000
0.0000
0.0000
081000
jpowers-varprowlSNP*segduphetalt
0.0000
0.0000
0.0000
07000
jpowers-varprowlSNP*segdupwithalt*
0.0000
100.0000
00000
jpowers-varprowlSNP*segdupwithalthet
0.0000
100.0000
00000
jpowers-varprowlSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNP*segdupwithalthomalt
0.0000
100.0000
00000
jpowers-varprowlSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPti*hetalt
0.0000
0.0000
0.0000
0582000
jpowers-varprowlSNPtiHG002complexvarhetalt
0.0000
0.0000
0.0000
0207000
jpowers-varprowlSNPtiHG002compoundhethetalt
0.0000
0.0000
0.0000
0579000
jpowers-varprowlSNPtidecoy*
0.0000
100.0000
00000
jpowers-varprowlSNPtidecoyhet
0.0000
100.0000
00000
jpowers-varprowlSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtidecoyhomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtifunc_cdshetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
06000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
012000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
012000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000