PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
85851-85900 / 86044 show all
astatham-gatkSNPtv**
99.5449
99.1184
99.9751
22.0764
961141854996105923961
25.5230
qzeng-customSNPtv**
99.4379
99.2180
99.6588
26.4392
96211575839586193282549
16.7276
jmaeng-gatkSNPtv**
99.5370
99.3842
99.6902
27.5023
9637195971963632299580
2.6711
ckim-gatkSNPtv**
99.5705
99.3991
99.7425
27.2376
9638635827963776248884
3.3762
jpowers-varprowlSNPtv**
99.3067
99.4773
99.1367
27.6192
964620506996486284021363
16.2223
ghariani-varprowlSNPtv**
98.9190
99.7874
98.0655
30.2667
9676202062967900190931348
7.0602
ndellapenna-hhgaSNPtv**
99.8629
99.7865
99.9395
20.8763
9676202070967646586175
29.8635
gduggal-snapfbSNPtv**
98.8423
99.7914
97.9112
28.0235
967675202396803620652782
3.7866
egarrison-hhgaSNPtv**
99.8815
99.8074
99.9558
20.9138
9678221868967852428112
26.1682
gduggal-bwafbSNPtv**
99.7254
99.8534
99.5978
25.3671
96827614229683793911282
7.2104
cchapple-customSNPtv**
99.7746
99.8756
99.6738
23.8746
96848412069676373167250
7.8939
ltrigg-rtg2SNPtv**
99.8284
99.8825
99.7743
19.4672
96855711399688102192110
5.0183
ltrigg-rtg1SNPtv**
99.8285
99.8863
99.7709
19.9654
96859311039688592225103
4.6292
raldana-dualsentieonSNPtv**
99.9049
99.8971
99.9127
21.2799
96869299896861284644
5.2010
hfeng-pmm1SNPtv**
99.9383
99.9053
99.9713
20.8629
96877291896869127843
15.4676
hfeng-pmm2SNPtv**
99.9268
99.9066
99.9471
21.6564
96878490696870551342
8.1871
hfeng-pmm3SNPtv**
99.9443
99.9171
99.9715
21.1004
96888680496880427631
11.2319
jlack-gatkSNPtv**
99.5956
99.9388
99.2547
27.4223
9690975939690087276194
2.6663
rpoplin-dv42SNPtv**
99.9512
99.9420
99.9604
21.8980
969128562969027384163
42.4479
ckim-dragenSNPtv**
99.8136
99.9495
99.6782
25.0811
9692004909694993130164
5.2396
jli-customSNPtv**
99.9049
99.9528
99.8570
21.1774
969232458969166138883
5.9798
dgrover-gatkSNPtv**
99.9211
99.9611
99.8812
22.3092
969313377969227115381
7.0252
eyeh-varpipeSNPtv**
98.8030
99.9607
97.6718
23.4743
96931738195864222851215
0.9409
bgallagher-sentieonSNPtv**
99.8908
99.9655
99.8163
21.9055
969355335969269178478
4.3722
ckim-isaacSNP**homalt
98.3805
96.8182
99.9940
14.4545
11426123755011426686950
72.4638
asubramanian-gatkSNP**homalt
98.8858
97.8294
99.9654
17.5292
115454425617115452140039
9.7500
gduggal-bwaplatSNP**homalt
98.9364
97.9135
99.9810
18.7279
1155537246241155217220194
88.1818
ckim-vqsrSNP**homalt
98.9894
98.0027
99.9961
17.7187
11565902357111565674541
91.1111
anovak-vgSNP**homalt
99.1091
98.7819
99.4384
16.6644
116578714375115843965435522
84.3955
gduggal-snapplatSNP**homalt
99.3703
98.8374
99.9089
19.1469
11664421372011662141063359
33.7723
gduggal-snapvardSNP**homalt
99.4378
98.9468
99.9337
17.0443
1167733124291158113768475
61.8490
mlin-fermikitSNP**homalt
98.9666
99.0041
98.9290
17.0911
11684091175311684251264912153
96.0787
gduggal-bwavardSNP**homalt
99.5128
99.0597
99.9700
16.7717
1169065110971159771348269
77.2989
ckim-gatkSNP**homalt
99.5941
99.1985
99.9929
17.5422
1170702945911706798352
62.6506
jmaeng-gatkSNP**homalt
99.5965
99.2051
99.9909
17.4792
11707809381117075710669
65.0943
qzeng-customSNP**homalt
99.6134
99.3243
99.9041
17.3884
1172188797411620901115707
63.4081
ciseli-customSNP**homalt
98.7740
99.5427
98.0170
19.0299
1174765539711681212363210880
46.0393
gduggal-snapfbSNP**homalt
99.6988
99.7992
99.5986
21.4529
1177792237011778604747451
9.5007
gduggal-bwafbSNP**homalt
99.9194
99.8626
99.9762
18.5273
117854116211178572280175
62.5000
ndellapenna-hhgaSNP**homalt
99.9243
99.8838
99.9648
18.1151
117879013711178818415332
80.0000
egarrison-hhgaSNP**homalt
99.9329
99.8872
99.9785
18.1960
117883013311178859253173
68.3794
cchapple-customSNP**homalt
99.9445
99.8940
99.9951
16.2464
1178910125111776365851
87.9310
ltrigg-rtg1SNP**homalt
99.9664
99.9480
99.9848
17.4153
11795436141179482179154
86.0335
jlack-gatkSNP**homalt
99.9692
99.9511
99.9872
17.3366
1179584577117955615196
63.5762
ltrigg-rtg2SNP**homalt
99.9694
99.9515
99.9872
17.0159
11795855721179505151139
92.0530
ckim-dragenSNP**homalt
99.9725
99.9534
99.9917
17.1093
117961155011798219880
81.6327
astatham-gatkSNP**homalt
99.9742
99.9548
99.9936
17.1971
117962753411796037667
88.1579
ghariani-varprowlSNP**homalt
99.7891
99.9588
99.6200
19.7823
1179670486117979245002208
49.0667
jpowers-varprowlSNP**homalt
99.8292
99.9606
99.6981
20.3193
1179696465117982235732211
61.8808
eyeh-varpipeSNP**homalt
99.9696
99.9699
99.9693
17.3914
11798073551154702355142
40.0000