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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
85701-85750 / 86044 show all
eyeh-varpipeSNP*HG002complexvarhet
99.8105
99.8904
99.7307
18.2348
4649905104296101160174
15.0000
dgrover-gatkSNP*HG002complexvarhet
99.9434
99.9156
99.9712
18.5452
46510439346497413453
39.5522
ckim-dragenSNP*HG002complexvarhet
99.9146
99.9212
99.9081
19.1598
465130367465401428195
45.5607
bgallagher-sentieonSNP*HG002complexvarhet
99.9449
99.9235
99.9662
18.4844
46514135646501115750
31.8471
ckim-isaacSNPtiHG002complexvar*
96.1858
92.7592
99.8753
15.7158
47162236815471809589446
75.7216
asubramanian-gatkSNPtiHG002complexvar*
98.3380
96.7457
99.9835
17.8536
491890165464918308136
44.4444
gduggal-snapvardSNPtiHG002complexvar*
97.8937
96.7473
99.0676
19.7850
4918981653848303945461783
39.2213
anovak-vgSNPtiHG002complexvar*
97.6154
96.7854
98.4597
17.8294
4920931634448465575826075
80.1240
gduggal-bwaplatSNPtiHG002complexvar*
97.9838
97.0464
98.9394
19.5056
493419150174937545293700
13.2250
ciseli-customSNPtiHG002complexvar*
96.3915
97.0905
95.7026
18.7897
49364414793488642219425540
25.2484
gduggal-bwavardSNPtiHG002complexvar*
98.2991
97.1039
99.5241
18.2603
4937121472548557623221599
68.8630
mlin-fermikitSNPtiHG002complexvar*
98.2652
97.2431
99.3090
16.9696
4944201401749440534403276
95.2326
ckim-vqsrSNPtiHG002complexvar*
98.8535
97.7474
99.9849
18.1351
496983114534969257538
50.6667
gduggal-snapplatSNPtiHG002complexvar*
98.2167
97.8257
98.6108
20.9389
4973821105549779970131203
17.1539
qzeng-customSNPtiHG002complexvar*
99.1315
98.4529
99.8194
18.2769
5005717866493623893400
44.7928
astatham-gatkSNPtiHG002complexvar*
99.2181
98.4614
99.9866
17.7102
50061378235005486741
61.1940
jmaeng-gatkSNPtiHG002complexvar*
99.5813
99.1995
99.9661
17.9457
504366407050430617177
45.0292
ckim-gatkSNPtiHG002complexvar*
99.5943
99.2243
99.9671
17.9110
504492394450443216674
44.5783
jpowers-varprowlSNPtiHG002complexvar*
99.5182
99.3169
99.7203
18.7923
50496134735051191417799
56.3867
gduggal-snapfbSNPtiHG002complexvar*
99.2700
99.6259
98.9167
19.8956
50653519025070435553819
14.7488
ndellapenna-hhgaSNPtiHG002complexvar*
99.8069
99.6755
99.9387
17.4775
5067861650506808311223
71.7042
cchapple-customSNPtiHG002complexvar*
99.8096
99.6932
99.9263
17.3694
5068761560505502373274
73.4584
egarrison-hhgaSNPtiHG002complexvar*
99.8425
99.7343
99.9509
17.5278
5070851351507107249148
59.4378
ghariani-varprowlSNPtiHG002complexvar*
99.5322
99.7412
99.3241
19.7678
50711313165072833452789
22.8563
ltrigg-rtg1SNPtiHG002complexvar*
99.8532
99.7400
99.9667
17.5108
507114132250703416980
47.3373
gduggal-bwafbSNPtiHG002complexvar*
99.8223
99.7766
99.8681
18.4222
5073011136507384670291
43.4328
ltrigg-rtg2SNPtiHG002complexvar*
99.8779
99.7988
99.9570
17.4272
507413102350731621898
44.9541
raldana-dualsentieonSNPtiHG002complexvar*
99.8917
99.7990
99.9846
17.3582
50741410225073547829
37.1795
hfeng-pmm1SNPtiHG002complexvar*
99.8935
99.8000
99.9872
17.3497
50741910175073606531
47.6923
hfeng-pmm2SNPtiHG002complexvar*
99.8914
99.8002
99.9829
17.3851
50742010165073618738
43.6782
hfeng-pmm3SNPtiHG002complexvar*
99.9019
99.8171
99.9868
17.4486
5075069305074466725
37.3134
rpoplin-dv42SNPtiHG002complexvar*
99.9216
99.8731
99.9701
17.4429
507791645507725152130
85.5263
jlack-gatkSNPtiHG002complexvar*
99.9170
99.8944
99.9396
17.8349
507899537507834307122
39.7394
eyeh-varpipeSNPtiHG002complexvar*
99.8888
99.9038
99.8738
17.3355
507948489484239612191
31.2092
jli-customSNPtiHG002complexvar*
99.9464
99.9180
99.9748
17.5160
50801941750797912858
45.3125
ckim-dragenSNPtiHG002complexvar*
99.9317
99.9245
99.9389
17.8695
508052384508287311156
50.1608
dgrover-gatkSNPtiHG002complexvar*
99.9530
99.9268
99.9791
17.5262
50806437250800010656
52.8302
bgallagher-sentieonSNPtiHG002complexvar*
99.9558
99.9337
99.9780
17.4939
50809933750803511253
47.3214
ckim-isaacSNPtv*het
98.4858
97.0571
99.9572
19.2906
5742911741357457624632
13.0081
gduggal-bwaplatSNPtv*het
98.5255
97.5640
99.5062
36.2003
577282144145775772866351
12.2470
mlin-fermikitSNPtv*het
98.7020
97.6537
99.7731
18.7114
57782113883577760131414
1.0655
asubramanian-gatkSNPtv*het
98.8211
97.8557
99.8057
26.7081
57900812688578944112742
3.7267
gduggal-snapplatSNPtv*het
98.3145
98.0664
98.5638
36.3598
580263114415806588461866
10.2352
anovak-vgSNPtv*het
97.9352
98.2070
97.6649
27.4537
58109510609580225138734566
32.9129
ciseli-customSNPtv*het
95.4085
98.2395
92.7361
26.7935
5812871041758058345476409
0.8994
astatham-gatkSNPtv*het
99.2722
98.5893
99.9647
23.3815
583349834758328220635
16.9903
ckim-vqsrSNPtv*het
99.3645
98.9162
99.8170
31.1430
5852836413585211107339
3.6347
gduggal-snapvardSNPtv*het
98.6977
99.0250
98.3726
31.6253
585935576958336696511423
14.7446
gduggal-bwavardSNPtv*het
99.1377
99.1291
99.1462
30.0519
586551515358408950301454
28.9066
qzeng-customSNPtv*het
99.3391
99.1721
99.5067
29.7409
58680548995855782903302
10.4030