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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
85651-85700 / 86044 show all
gduggal-bwafbSNPtv*homalt
99.9109
99.8520
99.9697
21.5631
37656555837657911464
56.1404
ndellapenna-hhgaSNPtv*homalt
99.9152
99.8722
99.9583
20.9089
376641482376648157123
78.3439
egarrison-hhgaSNPtv*homalt
99.9252
99.8738
99.9766
20.9039
3766474763766568860
68.1818
cchapple-customSNPtv*homalt
99.9396
99.8847
99.9947
18.4432
3766884353760842017
85.0000
astatham-gatkSNPtv*homalt
99.9694
99.9475
99.9912
19.9071
3769251983769103326
78.7879
ltrigg-rtg2SNPtv*homalt
99.9678
99.9486
99.9870
19.3650
3769271943769514941
83.6735
ltrigg-rtg1SNPtv*homalt
99.9663
99.9491
99.9836
19.8090
3769291923769636242
67.7419
jlack-gatkSNPtv*homalt
99.9678
99.9488
99.9867
20.1040
3769301933769125030
60.0000
ghariani-varprowlSNPtv*homalt
99.6533
99.9547
99.3538
23.4817
37695017137702324521194
48.6949
jpowers-varprowlSNPtv*homalt
99.7396
99.9576
99.5225
24.1122
37696316037703818091197
66.1692
ckim-dragenSNPtv*homalt
99.9757
99.9621
99.9894
19.9141
3769801433770834029
72.5000
rpoplin-dv42SNPtv*homalt
99.9702
99.9650
99.9753
20.9652
3769911323769709351
54.8387
eyeh-varpipeSNPtv*homalt
99.9630
99.9676
99.9583
19.9401
37700112237116515557
36.7742
dgrover-gatkSNPtv*homalt
99.9813
99.9706
99.9920
19.9848
3770121113769973024
80.0000
jli-customSNPtv*homalt
99.9816
99.9716
99.9915
19.9541
3770161073770053224
75.0000
bgallagher-sentieonSNPtv*homalt
99.9838
99.9759
99.9918
19.9074
377032913770173125
80.6452
raldana-dualsentieonSNPtv*homalt
99.9865
99.9801
99.9928
19.7814
377048753770422721
77.7778
hfeng-pmm1SNPtv*homalt
99.9869
99.9841
99.9897
20.7747
377063603770563921
53.8462
hfeng-pmm3SNPtv*homalt
99.9887
99.9854
99.9920
20.6594
377068553770603018
60.0000
hfeng-pmm2SNPtv*homalt
99.9869
99.9862
99.9875
20.9465
377071523770664724
51.0638
ckim-isaacSNP*HG002complexvarhet
96.2337
92.7890
99.9440
16.5252
4319333356743223024235
14.4628
ciseli-customSNP*HG002complexvarhet
95.7970
95.7987
95.7952
20.3525
4459431955743953919293621
3.2188
mlin-fermikitSNP*HG002complexvarhet
98.1632
96.4217
99.9688
17.2653
4488431665744874414023
16.4286
anovak-vgSNP*HG002complexvarhet
97.3572
96.6062
98.1199
19.3647
4497021579843902284126308
74.9881
gduggal-bwaplatSNP*HG002complexvarhet
97.5069
96.6621
98.3666
21.6545
449959155384508357486872
11.6484
asubramanian-gatkSNP*HG002complexvarhet
98.3318
96.7914
99.9221
19.0611
4505611493645044235131
8.8319
gduggal-snapvardSNP*HG002complexvarhet
97.7612
96.9682
98.5672
22.3358
4513861411343932463862268
35.5152
gduggal-snapplatSNP*HG002complexvarhet
97.4346
97.1046
97.7668
23.9217
45202213478453020103481516
14.6502
gduggal-bwavardSNP*HG002complexvarhet
98.2730
97.3044
99.2610
20.1947
4529521254844165932882162
65.7543
astatham-gatkSNP*HG002complexvarhet
98.7010
97.4496
99.9850
18.8713
453625118724534986828
41.1765
ckim-vqsrSNP*HG002complexvarhet
99.0965
98.2281
99.9803
19.3098
45724982484571249032
35.5556
qzeng-customSNP*HG002complexvarhet
99.0563
98.3261
99.7975
19.7489
4577087792449025911250
27.4424
jpowers-varprowlSNP*HG002complexvarhet
99.3948
98.9553
99.8382
20.0313
4606324863460862747150
20.0803
jmaeng-gatkSNP*HG002complexvarhet
99.7155
99.4778
99.9544
19.1665
463066243146293821165
30.8057
ckim-gatkSNP*HG002complexvarhet
99.7401
99.5255
99.9558
19.1024
463288220946316020569
33.6585
ndellapenna-hhgaSNP*HG002complexvarhet
99.7473
99.5353
99.9601
18.3091
463334216346335318579
42.7027
gduggal-snapfbSNP*HG002complexvarhet
98.8655
99.5639
98.1768
21.9725
46347020304642358621899
10.4280
egarrison-hhgaSNP*HG002complexvarhet
99.7873
99.6172
99.9580
18.3902
463715178246373819579
40.5128
ghariani-varprowlSNP*HG002complexvarhet
99.2312
99.6262
98.8393
22.3346
46375217404640235449138
2.5326
hfeng-pmm2SNP*HG002complexvarhet
99.8103
99.6430
99.9782
18.0375
463835166246370610115
14.8515
hfeng-pmm1SNP*HG002complexvarhet
99.8138
99.6436
99.9845
18.0286
46383816594637087219
26.3889
raldana-dualsentieonSNP*HG002complexvarhet
99.8134
99.6490
99.9784
18.1564
463863163446373310018
18.0000
hfeng-pmm3SNP*HG002complexvarhet
99.8290
99.6758
99.9825
18.2080
46398815094638598116
19.7531
ltrigg-rtg1SNP*HG002complexvarhet
99.8148
99.6788
99.9511
18.4181
464005149546423522759
25.9912
cchapple-customSNP*HG002complexvarhet
99.7839
99.6872
99.8808
18.7433
4640411456463256553394
71.2477
gduggal-bwafbSNP*HG002complexvarhet
99.7664
99.7319
99.8010
20.1804
4642521248464384926324
34.9892
ltrigg-rtg2SNP*HG002complexvarhet
99.8358
99.7414
99.9305
18.3888
464296120446451532394
29.1022
rpoplin-dv42SNP*HG002complexvarhet
99.8978
99.8245
99.9712
18.3215
464680817464534134101
75.3731
jlack-gatkSNP*HG002complexvarhet
99.8914
99.8855
99.8973
19.1615
464964533464834478152
31.7992
jli-customSNP*HG002complexvarhet
99.9263
99.8859
99.9667
18.4399
46496653146487215554
34.8387