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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1638 1639 1640 1641 1642 1643 1644 1645 1646 ... 1720 1721 » 82051-82100 / 86044 show all
bgallagher-sentieon	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.1348	99.8900	98.3909	39.6771	18163	20	18160	297	4	1.3468
dgrover-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3002	99.9010	98.7065	40.6968	18165	18	18162	238	4	1.6807
jli-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.2134	99.9065	98.5299	39.2599	18166	17	18163	271	4	1.4760
gduggal-bwafb	SNP	ti	map_l100_m2_e0	homalt	99.5892	99.2954	99.8846	63.9034	18180	129	18180	21	13	61.9048
eyeh-varpipe	SNP	ti	map_l125_m1_e0	het	98.9460	99.5456	98.3535	75.5124	18183	83	17801	298	15	5.0336
astatham-gatk	SNP	ti	map_l100_m2_e0	homalt	99.6302	99.3391	99.9231	59.5727	18188	121	18188	14	13	92.8571
ckim-dragen	SNP	ti	map_l100_m2_e0	homalt	99.6194	99.3610	99.8792	57.3994	18192	117	18197	22	20	90.9091
jpowers-varprowl	SNP	ti	map_l125_m2_e0	het	96.9503	96.4187	97.4878	78.3661	18200	676	18200	469	150	31.9829
mlin-fermikit	SNP	*	map_l100_m1_e0	homalt	73.8610	67.4221	81.6596	48.7624	18206	8797	18206	4089	3913	95.6958
dgrover-gatk	SNP	ti	map_l100_m2_e0	homalt	99.7264	99.5248	99.9287	59.9046	18222	87	18222	13	11	84.6154
rpoplin-dv42	SNP	ti	map_l100_m2_e0	homalt	99.6664	99.5412	99.7919	62.9736	18225	84	18226	38	36	94.7368
gduggal-snapvard	SNP	ti	map_l125_m2_e0	het	91.7410	96.5618	87.3786	82.2821	18227	649	18090	2613	206	7.8837
gduggal-bwaplat	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	90.4913	83.3097	99.0278	77.4266	18244	3655	18233	179	151	84.3575
jli-custom	SNP	ti	map_l100_m2_e0	homalt	99.8004	99.6614	99.9398	59.0453	18247	62	18247	11	11	100.0000
bgallagher-sentieon	SNP	ti	map_l100_m2_e0	homalt	99.7949	99.6668	99.9233	59.4718	18248	61	18248	14	12	85.7143
ndellapenna-hhga	SNP	ti	map_l100_m2_e0	homalt	99.7949	99.6723	99.9179	61.7916	18249	60	18249	15	15	100.0000
ltrigg-rtg2	SNP	ti	map_l100_m2_e0	homalt	99.8031	99.6778	99.9288	59.8461	18250	59	18249	13	13	100.0000
raldana-dualsentieon	SNP	ti	map_l100_m2_e0	homalt	99.8196	99.7105	99.9288	58.8267	18256	53	18256	13	12	92.3077
ltrigg-rtg1	SNP	ti	map_l100_m2_e0	homalt	99.8005	99.7214	99.8796	61.9278	18258	51	18258	22	22	100.0000
egarrison-hhga	SNP	ti	map_l100_m2_e0	homalt	99.8579	99.7870	99.9289	62.7872	18270	39	18270	13	13	100.0000
ckim-isaac	SNP	ti	map_l125_m2_e0	*	75.2532	60.4006	99.7925	72.3144	18276	11982	18276	38	7	18.4211
mlin-fermikit	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	*	92.9005	92.0300	93.7875	53.5986	18279	1583	18267	1210	1145	94.6281
hfeng-pmm1	SNP	ti	map_l100_m2_e0	homalt	99.8607	99.8416	99.8798	62.5925	18280	29	18280	22	12	54.5455
hfeng-pmm3	SNP	ti	map_l100_m2_e0	homalt	99.8662	99.8525	99.8798	62.5049	18282	27	18282	22	12	54.5455
eyeh-varpipe	SNP	ti	map_l100_m2_e0	homalt	99.8811	99.8744	99.8878	64.4546	18286	23	17806	20	12	60.0000
jlack-gatk	SNP	ti	map_l100_m2_e1	homalt	99.3913	98.8807	99.9071	60.0864	18287	207	18287	17	15	88.2353
hfeng-pmm2	SNP	ti	map_l100_m2_e0	homalt	99.8744	99.8798	99.8689	62.5825	18287	22	18287	24	14	58.3333
ghariani-varprowl	SNP	ti	map_l100_m2_e1	homalt	99.4248	99.0700	99.7822	63.1662	18322	172	18322	40	28	70.0000
jpowers-varprowl	SNP	ti	map_l100_m2_e1	homalt	99.4410	99.0808	99.8039	64.9625	18324	170	18324	36	28	77.7778
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	73.3800	60.1280	94.1249	85.4676	18327	12153	18328	1144	321	28.0594
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	73.3800	60.1280	94.1249	85.4676	18327	12153	18328	1144	321	28.0594
ciseli-custom	INDEL	D1_5	HG002complexvar	het	87.0231	88.2917	85.7906	58.0288	18332	2431	18318	3034	650	21.4239
cchapple-custom	SNP	ti	map_l125_m2_e0	het	96.4167	97.1816	95.6637	78.2290	18344	532	18355	832	229	27.5240
anovak-vg	SNP	*	map_l150_m2_e1	het	76.0838	90.1144	65.8336	81.6880	18350	2013	18149	9419	2135	22.6669
gduggal-bwafb	SNP	ti	map_l100_m2_e1	homalt	99.5933	99.3025	99.8858	63.9101	18365	129	18365	21	13	61.9048
qzeng-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	91.2907	89.1727	93.5118	37.7146	18366	2230	19068	1323	1081	81.7082
astatham-gatk	SNP	ti	map_l100_m2_e1	homalt	99.6312	99.3403	99.9239	59.5512	18372	122	18372	14	13	92.8571
gduggal-snapfb	SNP	ti	map_l125_m2_e0	het	96.4670	97.3405	95.6090	72.9883	18374	502	18377	844	395	46.8009
ckim-dragen	SNP	ti	map_l100_m2_e1	homalt	99.6178	99.3565	99.8804	57.3860	18375	119	18380	22	20	90.9091
ltrigg-rtg2	SNP	ti	map_l125_m2_e0	het	98.5679	97.3564	99.8099	58.2477	18377	499	18379	35	4	11.4286
ciseli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	79.2334	93.9527	68.5015	74.7853	18395	1184	18642	8572	188	2.1932
ciseli-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	79.2334	93.9527	68.5015	74.7853	18395	1184	18642	8572	188	2.1932
dgrover-gatk	SNP	ti	map_l100_m2_e1	homalt	99.7264	99.5242	99.9294	59.8793	18406	88	18406	13	11	84.6154
jpowers-varprowl	SNP	ti	map_l125_m2_e1	het	96.9708	96.4374	97.5102	78.4083	18407	680	18407	470	150	31.9149
rpoplin-dv42	SNP	ti	map_l100_m2_e1	homalt	99.6670	99.5404	99.7940	62.9692	18409	85	18410	38	36	94.7368
gduggal-bwavard	SNP	ti	map_l125_m2_e0	het	94.6336	97.6319	91.8139	83.0438	18429	447	18293	1631	107	6.5604
mlin-fermikit	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	85.8694	82.8315	89.1386	45.6102	18430	3820	18400	2242	2180	97.2346
jli-custom	SNP	ti	map_l100_m2_e1	homalt	99.7997	99.6593	99.9404	59.0260	18431	63	18431	11	11	100.0000
bgallagher-sentieon	SNP	ti	map_l100_m2_e1	homalt	99.7943	99.6648	99.9241	59.4504	18432	62	18432	14	12	85.7143
ndellapenna-hhga	SNP	ti	map_l100_m2_e1	homalt	99.7970	99.6756	99.9187	61.7788	18434	60	18434	15	15	100.0000

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