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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1637 1638 1639 1640 1641 1642 1643 1644 1645 ... 1720 1721 » 82001-82050 / 86044 show all
ltrigg-rtg1	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3427	99.6095	99.0772	37.9144	18112	71	18145	169	3	1.7752
raldana-dualsentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.6574	99.7082	97.6284	65.7023	18113	53	18113	440	428	97.2727
raldana-dualsentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.6574	99.7082	97.6284	65.7023	18113	53	18113	440	428	97.2727
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.7705	99.7193	97.8396	67.4095	18115	51	18115	400	388	97.0000
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7705	99.7193	97.8396	67.4095	18115	51	18115	400	388	97.0000
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.7571	99.7248	97.8080	67.5218	18116	50	18116	406	393	96.7980
ckim-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7571	99.7248	97.8080	67.5218	18116	50	18116	406	393	96.7980
qzeng-custom	SNP	*	func_cds	*	99.7598	99.8182	99.7016	28.7413	18117	33	18040	54	4	7.4074
jmaeng-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.3937	99.6425	99.1462	42.0410	18118	65	18115	156	2	1.2821
bgallagher-sentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.3553	99.7468	97.0021	67.1820	18120	46	18120	560	541	96.6071
bgallagher-sentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.3553	99.7468	97.0021	67.1820	18120	46	18120	560	541	96.6071
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.7709	99.7523	97.8086	67.6045	18121	45	18121	406	388	95.5665
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7709	99.7523	97.8086	67.6045	18121	45	18121	406	388	95.5665
ghariani-varprowl	SNP	*	func_cds	*	99.5441	99.8512	99.2389	30.8362	18123	27	18123	139	14	10.0719
ltrigg-rtg2	SNP	*	func_cds	*	99.6865	99.8678	99.5059	22.3605	18126	24	18125	90	1	1.1111
jmaeng-gatk	SNP	*	func_cds	*	99.4513	99.8678	99.0382	31.9360	18126	24	18123	176	1	0.5682
ckim-gatk	SNP	*	func_cds	*	99.6618	99.8678	99.4567	31.5863	18126	24	18123	99	1	1.0101
bgallagher-sentieon	INDEL	I1_5	HG002complexvar	het	99.7743	99.6591	99.8897	57.8575	18127	62	18108	20	10	50.0000
dgrover-gatk	INDEL	I1_5	HG002complexvar	het	99.7798	99.6646	99.8952	58.2404	18128	61	18108	19	9	47.3684
gduggal-snapplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	50.2628	41.8345	62.9440	73.1508	18129	25206	21603	12718	4309	33.8811
hfeng-pmm2	SNP	ti	map_l125_m1_e0	het	99.1603	99.2500	99.0708	74.2780	18129	137	18125	170	14	8.2353
anovak-vg	SNP	*	map_l150_m2_e0	het	75.9821	90.0512	65.7151	81.6508	18130	2003	17933	9356	2121	22.6699
ltrigg-rtg1	SNP	*	func_cds	*	99.6647	99.8898	99.4405	22.8252	18130	20	18129	102	1	0.9804
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.2011	99.7140	98.6934	41.6778	18131	52	18128	240	3	1.2500
ckim-gatk	INDEL	I1_5	HG002complexvar	het	99.7716	99.6866	99.8566	58.0913	18132	57	18110	26	13	50.0000
cchapple-custom	SNP	*	func_cds	*	99.7855	99.9174	99.6539	26.7611	18135	15	18142	63	1	1.5873
dgrover-gatk	SNP	ti	map_l125_m1_e0	het	99.2150	99.2992	99.1308	75.9575	18138	128	18134	159	33	20.7547
ghariani-varprowl	SNP	ti	map_l100_m2_e0	homalt	99.4217	99.0660	99.7800	63.1898	18138	171	18138	40	28	70.0000
jpowers-varprowl	SNP	ti	map_l100_m2_e0	homalt	99.4381	99.0770	99.8019	64.9829	18140	169	18140	36	28	77.7778
rpoplin-dv42	SNP	*	func_cds	*	99.9366	99.9449	99.9284	24.7263	18140	10	18137	13	3	23.0769
gduggal-bwafb	SNP	*	func_cds	*	99.6211	99.9504	99.2939	30.1552	18141	9	18141	129	2	1.5504
jli-custom	SNP	*	func_cds	*	99.9036	99.9559	99.8514	23.3699	18142	8	18142	27	0	0.0000
hfeng-pmm3	SNP	ti	map_l125_m1_e0	het	99.4436	99.3211	99.5663	71.0299	18142	124	18138	79	8	10.1266
jlack-gatk	SNP	*	func_cds	*	99.3020	99.9614	98.6513	31.6355	18143	7	18140	248	1	0.4032
hfeng-pmm1	SNP	*	func_cds	*	99.9366	99.9614	99.9119	23.2953	18143	7	18140	16	0	0.0000
raldana-dualsentieon	SNP	*	func_cds	*	99.8926	99.9614	99.8239	23.4025	18143	7	18140	32	0	0.0000
gduggal-snapfb	SNP	*	func_cds	*	99.6978	99.9614	99.4355	28.3431	18143	7	18143	103	2	1.9418
dgrover-gatk	SNP	*	func_cds	*	99.9284	99.9614	99.8954	24.8199	18143	7	18140	19	0	0.0000
ndellapenna-hhga	SNP	*	func_cds	*	99.9367	99.9614	99.9119	23.5700	18143	7	18143	16	0	0.0000
ckim-dragen	SNP	*	func_cds	*	99.5474	99.9669	99.1313	30.5099	18144	6	18144	159	1	0.6289
eyeh-varpipe	SNP	*	func_cds	*	98.2084	99.9669	96.5106	26.4105	18144	6	17950	649	1	0.1541
hfeng-pmm3	SNP	*	func_cds	*	99.9367	99.9669	99.9064	23.5356	18144	6	18141	17	0	0.0000
bgallagher-sentieon	SNP	*	func_cds	*	99.8899	99.9669	99.8129	24.1761	18144	6	18141	34	0	0.0000
egarrison-hhga	SNP	*	func_cds	*	99.9477	99.9725	99.9229	23.9159	18145	5	18145	14	0	0.0000
bgallagher-sentieon	SNP	ti	map_l125_m1_e0	het	99.0798	99.3430	98.8180	74.4018	18146	120	18142	217	33	15.2074
hfeng-pmm2	SNP	*	func_cds	*	99.9174	99.9780	99.8569	24.2548	18146	4	18143	26	0	0.0000
cchapple-custom	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.0953	99.8075	98.3931	40.1515	18148	35	18186	297	10	3.3670
jlack-gatk	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	98.2808	99.8350	96.7742	42.6049	18153	30	18150	605	8	1.3223
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.7859	99.8680	99.7039	39.7224	18159	24	18186	54	6	11.1111
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.8707	99.8790	99.8625	38.9762	18161	22	18154	25	8	32.0000

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