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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1596 1597 1598 1599 1600 1601 1602 1603 1604 ... 1720 1721 » 79951-80000 / 86044 show all
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.3940	99.7649	97.0603	61.7981	11457	27	11457	347	341	98.2709
bgallagher-sentieon	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	97.8021	99.7736	95.9069	61.4948	11458	26	11458	489	478	97.7505
dgrover-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.3899	99.7736	97.0441	62.0464	11458	26	11458	349	339	97.1347
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.8642	99.2036	98.5271	69.1157	11460	92	11104	166	51	30.7229
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.8642	99.2036	98.5271	69.1157	11460	92	11104	166	51	30.7229
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.5615	99.2123	99.9132	66.4238	11461	91	11511	10	8	80.0000
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5615	99.2123	99.9132	66.4238	11461	91	11511	10	8	80.0000
jli-custom	INDEL	D6_15	*	het	99.0350	98.8958	99.1747	58.3418	11464	128	11416	95	84	88.4211
ndellapenna-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.3503	99.2642	99.4366	68.8610	11467	85	11472	65	58	89.2308
ndellapenna-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.3503	99.2642	99.4366	68.8610	11467	85	11472	65	58	89.2308
jpowers-varprowl	SNP	*	map_l150_m0_e0	*	95.7982	95.3125	96.2888	84.7317	11468	564	11468	442	141	31.9005
eyeh-varpipe	SNP	tv	map_l150_m2_e1	*	97.5383	99.7218	95.4485	79.1599	11470	32	11408	544	14	2.5735
jlack-gatk	INDEL	D6_15	*	het	96.7124	98.9476	94.5760	63.3561	11470	122	11421	655	345	52.6718
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	het	69.5027	72.7855	66.5031	38.8732	11471	4289	21148	10652	8272	77.6568
egarrison-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.4755	99.3161	99.6354	69.3829	11473	79	11478	42	36	85.7143
egarrison-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.4755	99.3161	99.6354	69.3829	11473	79	11478	42	36	85.7143
rpoplin-dv42	INDEL	D6_15	*	het	97.5270	99.0079	96.0896	61.5469	11477	115	11451	466	447	95.9227
astatham-gatk	SNP	*	map_l100_m0_e0	homalt	99.3208	98.7866	99.8608	60.2139	11479	141	11479	16	12	75.0000
astatham-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.6831	99.3940	99.9739	63.4875	11482	70	11482	3	3	100.0000
astatham-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.6831	99.3940	99.9739	63.4875	11482	70	11482	3	3	100.0000
ltrigg-rtg2	INDEL	D6_15	*	het	99.2141	99.0942	99.3342	52.7094	11487	105	11339	76	26	34.2105
ghariani-varprowl	SNP	*	map_l150_m2_e0	homalt	98.9108	98.1879	99.6443	74.5311	11487	212	11487	41	25	60.9756
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7222	99.4720	99.9738	61.6817	11491	61	11440	3	1	33.3333
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7222	99.4720	99.9738	61.6817	11491	61	11440	3	1	33.3333
jpowers-varprowl	SNP	*	map_l150_m2_e0	homalt	98.9410	98.2306	99.6618	76.3825	11492	207	11492	39	26	66.6667
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.6620	99.4893	95.9007	73.2635	11493	59	11510	492	263	53.4553
ghariani-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.6620	99.4893	95.9007	73.2635	11493	59	11510	492	263	53.4553
jlack-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7223	99.4893	99.9565	63.3985	11493	59	11493	5	5	100.0000
jlack-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7223	99.4893	99.9565	63.3985	11493	59	11493	5	5	100.0000
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.3815	99.4979	95.3533	74.7822	11494	58	11512	561	264	47.0588
jpowers-varprowl	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.3815	99.4979	95.3533	74.7822	11494	58	11512	561	264	47.0588
jmaeng-gatk	INDEL	D6_15	*	het	98.5809	99.1891	97.9801	63.8389	11498	94	11448	236	191	80.9322
rpoplin-dv42	SNP	*	map_l100_m0_e0	homalt	99.3564	98.9759	99.7398	62.7443	11501	119	11501	30	27	90.0000
cchapple-custom	SNP	*	map_l150_m0_e0	*	95.8209	95.5951	96.0478	81.9455	11502	530	11495	473	120	25.3700
gduggal-bwafb	SNP	*	map_l100_m0_e0	homalt	99.4296	99.0017	99.8611	65.4925	11504	116	11504	16	10	62.5000
mlin-fermikit	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	85.8009	91.8776	80.4781	48.4090	11504	1017	11378	2760	2725	98.7319
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7788	99.5931	99.9652	63.6860	11505	47	11505	4	3	75.0000
dgrover-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7788	99.5931	99.9652	63.6860	11505	47	11505	4	3	75.0000
jlack-gatk	SNP	*	map_l150_m2_e0	homalt	99.0914	98.3503	99.8438	71.6709	11506	193	11506	18	13	72.2222
gduggal-bwaplat	SNP	ti	map_l100_m2_e0	homalt	77.1723	62.8434	99.9652	71.1284	11506	6803	11495	4	4	100.0000
gduggal-bwaplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	87.4697	78.9719	98.0167	90.7130	11507	3064	11515	233	49	21.0300
gduggal-bwaplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	87.4697	78.9719	98.0167	90.7130	11507	3064	11515	233	49	21.0300
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7919	99.6278	99.9566	63.4476	11509	43	11509	5	4	80.0000
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.7919	99.6278	99.9566	63.4476	11509	43	11509	5	4	80.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.8049	99.6537	99.9566	69.9831	11512	40	11514	5	2	40.0000
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.8049	99.6537	99.9566	69.9831	11512	40	11514	5	2	40.0000
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	82.0910	79.0543	85.3704	89.9548	11519	3052	11560	1981	144	7.2691
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	82.0910	79.0543	85.3704	89.9548	11519	3052	11560	1981	144	7.2691
ckim-vqsr	INDEL	D6_15	*	het	98.8252	99.3703	98.2861	64.1967	11519	73	11469	200	170	85.0000
raldana-dualsentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.8483	99.7230	99.9740	62.7618	11520	32	11520	3	3	100.0000

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