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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
79051-79100 / 86044 show all
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8080
99.6266
99.9901
51.1176
10140381010311
100.0000
gduggal-bwaplatINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
82.9662
72.2705
97.3775
48.0824
10141389110137273266
97.4359
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.6120
99.6463
99.5777
54.2814
1014236101394340
93.0233
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7100
99.6561
99.7639
53.8981
1014335101412424
100.0000
gduggal-snapplatSNPtvmap_l150_m2_e0*
92.0132
89.3351
94.8569
86.0094
10144121110144550292
53.0909
asubramanian-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8131
99.6954
99.9311
54.3062
10147311014877
100.0000
gduggal-snapplatSNP*map_l150_m2_e0homalt
92.8770
86.7681
99.9113
74.6788
1015115481014299
100.0000
ltrigg-rtg2INDEL*lowcmp_SimpleRepeat_diTR_11to50hetalt
98.1282
96.9069
99.3807
45.7062
10151324104306564
98.4615
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.5998
99.7544
99.4458
51.6487
1015325105875958
98.3051
ltrigg-rtg2SNPtvmap_l125_m2_e0het
98.4778
97.2706
99.7153
57.2310
1015728510156292
6.8966
ndellapenna-hhgaINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7349
99.8133
99.6566
54.0176
1015919101573530
85.7143
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9017
99.8231
99.9803
53.8406
10160181016022
100.0000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9066
99.8428
99.9705
54.1001
10162161016233
100.0000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8767
99.8821
99.8712
51.6311
1016612100841311
84.6154
egarrison-hhgaINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7987
99.8821
99.7155
54.3488
1016612101642924
82.7586
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9263
99.9017
99.9509
53.9245
10168101016855
100.0000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9312
99.9214
99.9410
54.0442
1017081017066
100.0000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9214
99.9214
99.9214
54.3038
1017081016988
100.0000
ckim-vqsrINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9116
99.9214
99.9018
54.3272
101708101701010
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9214
99.9312
99.9116
54.3329
1017171016799
100.0000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9361
99.9509
99.9214
54.3780
1017351017388
100.0000
jli-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9411
99.9607
99.9214
54.0979
1017441017488
100.0000
ckim-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9312
99.9607
99.9018
54.3175
101744101741010
100.0000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9411
99.9607
99.9214
54.3285
1017441017488
100.0000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9362
99.9607
99.9116
54.3220
1017441017499
100.0000
dgrover-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9362
99.9607
99.9116
54.3466
1017441017499
100.0000
raldana-dualsentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9509
99.9705
99.9313
54.2320
1017531017577
100.0000
ndellapenna-hhgaINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
89.0249
97.7996
81.6952
39.8894
101782291056423672280
96.3245
ckim-isaacINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
93.3376
91.6367
95.1028
49.5731
101799299943512284
55.4688
gduggal-snapvardSNPtvmap_l125_m2_e0het
90.6936
97.4909
84.7824
82.7072
10180262101511822114
6.2569
gduggal-snapvardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
82.8096
94.2598
73.8399
86.2952
10181620100093546141
3.9763
gduggal-snapplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
92.9747
88.1319
98.3807
75.7191
1018113711020716859
35.1190
gduggal-snapplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
92.9747
88.1319
98.3807
75.7191
1018113711020716859
35.1190
gduggal-snapplatSNP*map_l100_m0_e0homalt
93.3571
87.6248
99.8920
65.0376
101821438101761111
100.0000
ciseli-customSNPtimap_l100_m0_e0het
78.5726
72.8313
85.2966
78.4054
10184379910181175557
3.2479
jpowers-varprowlSNPtvmap_l125_m2_e1het
96.3352
96.5223
96.1488
80.1525
101863671018640895
23.2843
gduggal-bwaplatINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
78.1296
65.4234
96.9610
81.1140
1019153861017831994
29.4671
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_diTR_11to50homalt
99.0139
98.4069
99.6285
44.6543
10192165101913837
97.3684
ghariani-varprowlINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
74.0005
97.9533
59.4604
43.3923
101942131022669726772
97.1314
cchapple-customSNPtvmap_l125_m2_e0het
95.6050
97.6250
93.6669
79.2937
1019424810220691117
16.9320
raldana-dualsentieonINDELI1_5HG002compoundhethetalt
95.4154
91.2409
99.9902
55.7998
101989791025311
100.0000
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_quadTR_11to50het
93.4986
91.8437
95.2143
47.2808
1020290616374823701
85.1762
jmaeng-gatkINDELI1_5HG002compoundhethetalt
95.4604
91.3394
99.9708
56.0929
102099681026633
100.0000
jlack-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
95.6093
91.9316
99.5935
30.0616
10209896102904237
88.0952
ltrigg-rtg1SNPtvmap_l125_m2_e0het
98.7191
97.7974
99.6584
61.3796
1021223010211355
14.2857
asubramanian-gatkSNP*map_l125_m2_e1het
51.2109
34.4568
99.6778
92.5521
102131942710210338
24.2424
raldana-dualsentieonINDELI1_5*hetalt
95.4134
91.2372
99.9903
60.4923
102149811027111
100.0000
gduggal-snapplatSNPtimap_l125_m2_e0homalt
94.6768
89.9630
99.9119
68.9436
1021811401020799
100.0000
mlin-fermikitSNP*map_l125_m2_e1homalt
66.2819
58.2991
76.7977
57.4167
1022173111022130882926
94.7539
ltrigg-rtg1INDEL*lowcmp_SimpleRepeat_diTR_11to50homalt
99.2568
98.6869
99.8334
39.3004
10221136101861716
94.1176