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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TP Truth FNQuery TPQuery FPFP gt% FP ma
75901-75950 / 86044 show all
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.5955
95.4157
97.8049
67.5959
55782685525124115
92.7419
jmaeng-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.0147
91.6982
94.3696
64.0306
55785055464326313
96.0123
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
96.4903
94.0829
99.0241
51.3046
558135155815550
90.9091
astatham-gatkSNPtvmap_l150_m2_e0het
86.7915
76.9719
99.4830
83.9440
558216705580298
27.5862
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.2655
94.7083
99.9646
39.5202
5584312564522
100.0000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.2655
94.7083
99.9646
39.5202
5584312564522
100.0000
hfeng-pmm1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
96.7098
95.5696
97.8776
67.1394
55872595534120110
91.6667
hfeng-pmm1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
96.7098
95.5696
97.8776
67.1394
55872595534120110
91.6667
qzeng-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
90.5625
95.5867
86.0400
54.3416
5588258134732186990
45.2882
qzeng-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
90.5625
95.5867
86.0400
54.3416
5588258134732186990
45.2882
gduggal-snapfbINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
74.4014
87.0872
64.9416
71.9724
559182966133570542
15.1821
gduggal-snapfbINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
74.4014
87.0872
64.9416
71.9724
559182966133570542
15.1821
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.3638
94.8948
99.9647
39.6673
5595301565622
100.0000
dgrover-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.3638
94.8948
99.9647
39.6673
5595301565622
100.0000
ckim-isaacINDEL*map_siren*
85.3582
75.5331
98.1215
78.4772
55971813558910746
42.9907
asubramanian-gatkSNP*map_l150_m2_e0het
43.4711
27.8051
99.5729
95.1282
5598145355595246
25.0000
gduggal-snapfbINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
75.5526
81.0392
70.7618
54.7757
5599131042451754345
19.6693
gduggal-snapfbINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
81.4700
91.7896
73.2362
71.7064
560150164362352386
16.4116
jli-customINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.0633
94.3415
99.9468
62.9123
5602336564133
100.0000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
58.4037
95.8604
41.9946
60.0631
5604242563477827720
99.2033
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
58.4037
95.8604
41.9946
60.0631
5604242563477827720
99.2033
ndellapenna-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
86.8526
95.8946
79.3688
62.7255
5606240636316541576
95.2842
ndellapenna-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
86.8526
95.8946
79.3688
62.7255
5606240636316541576
95.2842
rpoplin-dv42INDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.9646
94.4089
99.6626
61.7069
560633256121918
94.7368
egarrison-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
74.9981
60.3703
98.9815
39.2947
5609368252485446
85.1852
egarrison-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
74.9981
60.3703
98.9815
39.2947
5609368252485446
85.1852
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.9885
94.6447
99.4513
62.5582
562031861633432
94.1176
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.3987
98.9438
99.8577
44.3311
562160561488
100.0000
ckim-dragenINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.0947
92.4215
93.7777
64.0101
56224615501365358
98.0822
gduggal-snapplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
83.7447
84.4675
83.0341
89.9808
562310345643115377
6.6782
raldana-dualsentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.1157
94.7910
99.5574
48.6452
562330956232523
92.0000
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
98.7429
98.1158
99.3780
55.1561
562410857523618
50.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.1903
92.5366
93.8532
64.0267
56294545512361345
95.5679
ndellapenna-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
96.7691
94.9258
98.6854
40.6471
563130156307556
74.6667
ckim-dragenINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.3380
94.8299
99.9823
61.6765
5631307565911
100.0000
gduggal-bwaplatINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
86.5921
77.7149
97.7589
44.5846
563216155627129105
81.3953
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
88.8708
82.4960
96.3134
28.0265
5632119516726439
60.9375
gduggal-snapfbSNPtvmap_l125_m1_e0homalt
97.7782
96.1263
99.4878
77.1149
56332275633297
24.1379
ndellapenna-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
75.1664
60.6286
98.8753
39.2261
5633365851875947
79.6610
ndellapenna-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
75.1664
60.6286
98.8753
39.2261
5633365851875947
79.6610
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.1031
99.1903
99.0160
51.1670
56354656355656
100.0000
ckim-vqsrSNPtvmap_l150_m2_e0*
65.9681
49.6257
98.3589
92.1554
563557205634940
0.0000
gduggal-snapplatSNP*map_l125_m0_e0homalt
91.2357
83.9839
99.8583
72.7044
56371075563788
100.0000
hfeng-pmm3INDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.3996
94.9310
100.0000
60.6737
5637301567400
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
86.5434
96.4420
78.4876
62.7159
5638208621717041642
96.3615
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
86.5434
96.4420
78.4876
62.7159
5638208621717041642
96.3615
rpoplin-dv42INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.0321
95.0607
99.0869
48.8550
563929356435249
94.2308
asubramanian-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.2431
99.2607
97.2461
57.3108
5639425650160149
93.1250
ckim-vqsrINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.6836
92.7338
94.6530
63.9970
56414425523312296
94.8718
ciseli-customSNPtimap_l125_m0_e0het
74.4671
68.2803
81.8868
84.0446
564226215642124840
3.2051