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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1100 1101 1102 1103 1104 1105 1106 1107 1108 ... 1720 1721 » 55151-55200 / 86044 show all
hfeng-pmm1	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	96.4427	100.0000	93.1298	86.0341	122	0	122	9	9	100.0000
dgrover-gatk	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	96.0630	100.0000	92.4242	87.5000	122	0	122	10	10	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	71.9540	122	0	122	0	0
ckim-vqsr	INDEL	D6_15	map_l100_m1_e0	het	94.9416	96.8254	93.1298	92.1557	122	4	122	9	2	22.2222
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	94.4079	91.7293	97.2477	87.7940	122	11	106	3	3	100.0000
ckim-vqsr	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	72.3982	122	0	122	0	0
ckim-isaac	INDEL	D1_5	map_l150_m1_e0	homalt	69.5157	53.5088	99.1870	82.9167	122	106	122	1	1	100.0000
egarrison-hhga	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	93.2767	96.0630	90.6475	74.0187	122	5	126	13	7	53.8462
dgrover-gatk	INDEL	*	segdup	hetalt	96.8254	93.8462	100.0000	94.7679	122	8	124	0	0
dgrover-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.2332	96.8504	97.6190	79.0698	123	4	123	3	2	66.6667
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	53.2627	83.1081	39.1892	51.8438	123	25	87	135	134	99.2593
dgrover-gatk	INDEL	D6_15	map_l100_m1_e0	het	96.0938	97.6190	94.6154	90.3274	123	3	123	7	2	28.5714
dgrover-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	95.2384	92.4812	98.1651	88.0482	123	10	107	2	2	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.2332	96.8504	97.6190	80.0633	123	4	123	3	2	66.6667
cchapple-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	93.5361	96.8504	90.4412	37.6147	123	4	123	13	12	92.3077
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	78.8110	71.5116	87.7698	75.9099	123	49	122	17	11	64.7059
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	47.6401	79.3548	34.0369	66.9573	123	32	129	250	2	0.8000
ckim-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.2332	96.8504	97.6190	80.0633	123	4	123	3	2	66.6667
ckim-gatk	INDEL	D6_15	map_l100_m1_e0	het	94.2529	97.6190	91.1111	91.9355	123	3	123	12	2	16.6667
qzeng-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	81.9826	70.2857	98.3498	45.7961	123	52	298	5	4	80.0000
ndellapenna-hhga	INDEL	D6_15	map_l100_m1_e0	het	93.2926	97.6190	89.3333	87.2557	123	3	134	16	8	50.0000
jli-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	94.9807	96.8504	93.1818	46.5587	123	4	123	9	8	88.8889
jli-custom	INDEL	D6_15	map_l100_m1_e0	het	96.8658	97.6190	96.1240	87.0221	123	3	124	5	1	20.0000
jli-custom	INDEL	D6_15	map_l125_m2_e1	*	97.6190	96.0938	99.1935	89.4288	123	5	123	1	0	0.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	96.8504	96.8504	96.8504	78.9037	123	4	123	4	4	100.0000
jmaeng-gatk	INDEL	D6_15	map_l100_m1_e0	het	96.0938	97.6190	94.6154	92.1734	123	3	123	7	2	28.5714
astatham-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.2332	96.8504	97.6190	78.9649	123	4	123	3	2	66.6667
astatham-gatk	INDEL	D6_15	map_l100_m1_e0	het	95.3488	97.6190	93.1818	89.9772	123	3	123	9	2	22.2222
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.2332	96.8504	97.6190	78.7879	123	4	123	3	2	66.6667
anovak-vg	INDEL	I1_5	map_l100_m0_e0	het	47.2130	37.7301	63.0631	92.0173	123	203	140	82	10	12.1951
eyeh-varpipe	INDEL	D6_15	map_l100_m2_e1	het	91.2869	91.1111	91.4634	82.8452	123	12	150	14	13	92.8571
hfeng-pmm1	INDEL	D6_15	map_l100_m1_e0	het	97.2332	97.6190	96.8504	86.2256	123	3	123	4	1	25.0000
jlack-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	96.0998	93.1818	99.2063	80.5855	123	9	125	1	1	100.0000
hfeng-pmm3	INDEL	D6_15	map_l100_m1_e0	het	98.0080	97.6190	98.4000	87.6115	123	3	123	2	0	0.0000
hfeng-pmm3	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	*	74.7720	59.7087	100.0000	57.0934	123	83	124	0	0
hfeng-pmm2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	87.5596	80.9211	95.3846	90.3561	123	29	124	6	0	0.0000
rpoplin-dv42	INDEL	D6_15	map_l100_m1_e0	het	94.6154	97.6190	91.7910	88.3173	123	3	123	11	6	54.5455
rpoplin-dv42	INDEL	D6_15	map_l125_m2_e0	*	98.4000	97.6190	99.1935	90.1587	123	3	123	1	0	0.0000
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	85.9089	82.5503	89.5522	75.5027	123	26	120	14	12	85.7143
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	75.9259	61.5000	99.1935	60.2564	123	77	123	1	1	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	53.8849	51.2397	56.8182	60.5970	124	118	150	114	77	67.5439
ghariani-varprowl	INDEL	D6_15	map_l100_m1_e0	het	77.2586	98.4127	63.5897	89.5161	124	2	124	71	65	91.5493
bgallagher-sentieon	INDEL	D6_15	map_l100_m1_e0	het	95.7529	98.4127	93.2331	89.8162	124	2	124	9	2	22.2222
asubramanian-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	96.5069	93.9394	99.2188	80.8096	124	8	127	1	1	100.0000
ndellapenna-hhga	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	81.8737	70.8571	96.9466	64.3052	124	51	127	4	2	50.0000
qzeng-custom	INDEL	I1_5	map_l150_m2_e0	homalt	75.8531	61.6915	98.4536	88.1055	124	77	191	3	2	66.6667
mlin-fermikit	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt	77.5000	97.6378	64.2487	59.3684	124	3	124	69	69	100.0000
egarrison-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	het	59.0700	91.8519	43.5331	43.8938	124	11	138	179	177	98.8827
egarrison-hhga	INDEL	D6_15	map_l100_m1_e0	het	94.2063	98.4127	90.3448	86.6236	124	2	131	14	9	64.2857
ckim-isaac	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	84.9618	80.0000	90.5797	79.6460	124	31	125	13	2	15.3846

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