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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 999 1000 1001 1002 1003 1004 1005 1006 1007 ... 1720 1721 » 50101-50150 / 86044 show all
ckim-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	95.4545	95.4545	95.4545	96.8594	42	2	42	2	0	0.0000
ckim-gatk	INDEL	D1_5	map_l100_m2_e1	hetalt	90.3226	82.3529	100.0000	91.7939	42	9	43	0	0
ckim-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.3401	42	3	42	0	0
ckim-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	41.0959	42	1	42	1	1	100.0000
ghariani-varprowl	INDEL	I16_PLUS	map_siren	het	73.0435	85.7143	63.6364	80.1205	42	7	42	24	23	95.8333
ghariani-varprowl	INDEL	I1_5	map_l250_m2_e1	homalt	94.3820	91.3043	97.6744	93.9266	42	4	42	1	1	100.0000
gduggal-snapvard	INDEL	D6_15	map_l150_m2_e0	het	79.0507	91.3043	69.6970	89.1089	42	4	69	30	19	63.3333
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	40.9756	28.1879	75.0000	50.6849	42	107	81	27	27	100.0000
ghariani-varprowl	INDEL	D16_PLUS	map_l100_m1_e0	het	70.0000	91.3043	56.7568	95.0634	42	4	42	32	22	68.7500
ghariani-varprowl	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	18.9387	11.0818	65.0794	81.9484	42	337	41	22	12	54.5455
ghariani-varprowl	INDEL	D1_5	map_l250_m0_e0	*	75.6757	91.3043	64.6154	97.7586	42	4	42	23	2	8.6957
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	17.0622	9.6110	75.9259	78.6561	42	395	41	13	13	100.0000
gduggal-snapplat	SNP	ti	tech_badpromoters	het	93.3333	95.4545	91.3043	68.9189	42	2	42	4	0	0.0000
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	26.6667	33.8710	21.9895	96.6397	42	82	42	149	5	3.3557
gduggal-snapvard	INDEL	D16_PLUS	HG002compoundhet	*	3.4436	1.7941	42.7184	52.9680	42	2299	44	59	35	59.3220
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e0	homalt	82.3529	70.0000	100.0000	96.7807	42	18	48	0	0
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e1	homalt	82.3529	70.0000	100.0000	96.8545	42	18	48	0	0
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	50.0000	39.0909	69.3548	97.6108	43	67	43	19	8	42.1053
gduggal-snapplat	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	*	27.4760	30.0699	25.2941	98.0122	43	100	43	127	9	7.0866
gduggal-snapfb	INDEL	D1_5	map_l250_m0_e0	*	91.4894	93.4783	89.5833	97.2650	43	3	43	5	0	0.0000
gduggal-snapfb	INDEL	D1_5	segdup	hetalt	90.5263	82.6923	100.0000	98.1308	43	9	14	0	0
gduggal-snapfb	INDEL	I1_5	map_l250_m1_e0	homalt	95.5556	97.7273	93.4783	96.7742	43	1	43	3	2	66.6667
gduggal-snapfb	INDEL	I1_5	segdup	hetalt	87.9440	89.5833	86.3636	97.6471	43	5	19	3	1	33.3333
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	59.4318	53.0864	67.5000	54.5455	43	38	54	26	25	96.1538
ghariani-varprowl	INDEL	I6_15	*	hetalt	0.0000	0.5029	0.0000	0.0000	43	8508	0	0	0
ghariani-varprowl	INDEL	I6_15	HG002compoundhet	hetalt	0.0000	0.5037	0.0000	0.0000	43	8494	0	0	0
ghariani-varprowl	SNP	ti	tech_badpromoters	het	94.5055	97.7273	91.4894	52.0408	43	1	43	4	0	0.0000
gduggal-snapvard	INDEL	D6_15	map_l150_m2_e1	het	79.3149	91.4894	70.0000	89.2473	43	4	70	30	19	63.3333
gduggal-snapvard	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	38.3929	0.0000	0.0000	43	69	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	58.1081	0.0000	0.0000	43	31	0	0	0
gduggal-snapplat	INDEL	*	map_siren	hetalt	28.1292	17.4089	73.2143	97.8495	43	204	41	15	8	53.3333
ghariani-varprowl	INDEL	*	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	0.0000	1.6033	0.0000	0.0000	43	2639	0	0	0
eyeh-varpipe	INDEL	I1_5	map_l250_m1_e0	homalt	98.0930	97.7273	98.4615	95.3472	43	1	64	1	1	100.0000
eyeh-varpipe	INDEL	I6_15	map_l100_m1_e0	het	79.4144	72.8814	87.2340	74.7312	43	16	82	12	10	83.3333
gduggal-bwavard	INDEL	I1_5	map_l250_m2_e1	homalt	94.5055	93.4783	95.5556	92.6948	43	3	43	2	1	50.0000
gduggal-bwafb	INDEL	D1_5	map_l250_m0_e0	*	94.5055	93.4783	95.5556	97.5179	43	3	43	2	0	0.0000
gduggal-bwafb	INDEL	D6_15	map_l150_m2_e0	het	95.7563	93.4783	98.1481	89.2000	43	3	53	1	0	0.0000
gduggal-bwafb	INDEL	I1_5	segdup	hetalt	92.2122	89.5833	95.0000	97.6771	43	5	19	1	1	100.0000
gduggal-bwafb	INDEL	I6_15	map_l100_m2_e0	het	82.6923	70.4918	100.0000	82.5175	43	18	50	0	0
gduggal-bwafb	INDEL	I6_15	map_l100_m2_e1	het	82.6923	70.4918	100.0000	82.8179	43	18	50	0	0
gduggal-bwaplat	INDEL	D6_15	map_l100_m1_e0	homalt	80.3738	67.1875	100.0000	87.6081	43	21	43	0	0
gduggal-bwaplat	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	68.2540	52.4390	97.7273	85.7605	43	39	43	1	1	100.0000
gduggal-bwaplat	INDEL	I1_5	map_l250_m2_e0	*	55.1282	38.0531	100.0000	99.0247	43	70	43	0	0
gduggal-bwaplat	INDEL	D16_PLUS	map_l100_m2_e1	*	60.9929	44.3299	97.7273	95.8015	43	54	43	1	1	100.0000
eyeh-varpipe	INDEL	I6_15	segdup	homalt	82.6923	91.4894	75.4386	87.6356	43	4	43	14	14	100.0000
eyeh-varpipe	SNP	*	map_l100_m2_e1	hetalt	99.6805	100.0000	99.3631	67.6289	43	0	312	2	1	50.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e1	hetalt	99.4012	100.0000	98.8095	70.6294	43	0	166	2	1	50.0000
jli-custom	INDEL	D16_PLUS	map_l100_m2_e0	het	90.3408	89.5833	91.1111	94.6492	43	5	41	4	2	50.0000
jli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	76.5027	43	0	43	0	0
jli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	94.5517	91.4894	97.8261	77.4510	43	4	45	1	1	100.0000

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