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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 998 999 1000 1001 1002 1003 1004 1005 1006 ... 1720 1721 » 50051-50100 / 86044 show all
ckim-isaac	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	64.1449	48.2759	95.5556	76.5625	42	45	43	2	2	100.0000
egarrison-hhga	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	52.8090	42	1	42	0	0
jlack-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	42.6667	42	1	42	1	1	100.0000
jlack-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.6744	95.4545	100.0000	75.1479	42	2	42	0	0
jlack-gatk	INDEL	I6_15	segdup	hetalt	96.5517	93.3333	100.0000	90.3448	42	3	42	0	0
jlack-gatk	INDEL	D16_PLUS	map_l100_m1_e0	het	83.7549	91.3043	77.3585	95.9726	42	4	41	12	4	33.3333
jlack-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	92.3077	85.7143	100.0000	25.0000	42	7	42	0	0
jlack-gatk	INDEL	D1_5	map_l100_m2_e0	hetalt	93.3333	87.5000	100.0000	91.3402	42	6	42	0	0
jlack-gatk	INDEL	D6_15	segdup	hetalt	92.3077	85.7143	100.0000	90.2552	42	7	42	0	0
hfeng-pmm2	SNP	*	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	78.8945	42	0	42	0	0
hfeng-pmm2	SNP	tv	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	78.8945	42	0	42	0	0
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	het	85.1927	82.3529	88.2353	94.1379	42	9	30	4	0	0.0000
hfeng-pmm1	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.7701	42	2	42	0	0
hfeng-pmm1	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.7810	42	2	42	0	0
hfeng-pmm1	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	38.2353	42	1	42	0	0
hfeng-pmm1	SNP	*	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	78.6802	42	0	42	0	0
hfeng-pmm1	SNP	tv	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	78.6802	42	0	42	0	0
hfeng-pmm2	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	87.3181	84.0000	90.9091	83.8235	42	8	40	4	2	50.0000
hfeng-pmm3	INDEL	D1_5	map_l100_m1_e0	hetalt	94.3820	89.3617	100.0000	89.9761	42	5	42	0	0
hfeng-pmm3	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	51.7241	42	1	42	0	0
hfeng-pmm3	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8235	97.6744	100.0000	76.5363	42	1	42	0	0
hfeng-pmm3	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.2308	42	3	42	0	0
hfeng-pmm3	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	37.3134	42	1	42	0	0
hfeng-pmm3	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.6744	95.4545	100.0000	75.4386	42	2	42	0	0
hfeng-pmm3	SNP	*	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	78.5714	42	0	42	0	0
hfeng-pmm3	SNP	tv	map_l100_m2_e0	hetalt	100.0000	100.0000	100.0000	78.5714	42	0	42	0	0
hfeng-pmm1	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8235	97.6744	100.0000	76.4045	42	1	42	0	0
hfeng-pmm1	INDEL	I16_PLUS	HG002compoundhet	het	88.6756	89.3617	88.0000	93.8725	42	5	22	3	2	66.6667
hfeng-pmm2	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	82.3529	73.6842	93.3333	99.4485	42	15	42	3	0	0.0000
hfeng-pmm2	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.7701	42	2	42	0	0
hfeng-pmm2	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.7810	42	2	42	0	0
hfeng-pmm2	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	40.0000	42	1	42	0	0
hfeng-pmm2	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.6744	95.4545	100.0000	75.8621	42	2	42	0	0
cchapple-custom	INDEL	I6_15	func_cds	*	97.7008	97.6744	97.7273	35.2941	42	1	43	1	1	100.0000
cchapple-custom	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	95.4545	0.0000	0.0000	42	2	0	0	0
cchapple-custom	SNP	*	map_l100_m2_e0	hetalt	0.0000	100.0000	0.0000	0.0000	42	0	0	0	0
cchapple-custom	SNP	tv	map_l100_m2_e0	hetalt	0.0000	100.0000	0.0000	0.0000	42	0	0	0	0
ciseli-custom	INDEL	*	tech_badpromoters	*	58.7413	55.2632	62.6866	50.3704	42	34	42	25	17	68.0000
ckim-dragen	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	94.3820	95.4545	93.3333	96.9512	42	2	42	3	1	33.3333
ckim-dragen	INDEL	D1_5	map_l100_m2_e0	hetalt	93.3333	87.5000	100.0000	90.3153	42	6	43	0	0
ckim-dragen	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	56.7010	42	1	42	0	0
ckim-dragen	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	97.6744	97.6744	97.6744	79.9065	42	1	42	1	1	100.0000
ckim-dragen	INDEL	D6_15	segdup	hetalt	92.3077	85.7143	100.0000	89.7810	42	7	42	0	0
ckim-dragen	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	88.3657	42	3	42	0	0
ckim-dragen	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	43.4211	42	1	42	1	1	100.0000
ckim-dragen	SNP	*	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	80.8219	42	1	42	0	0
cchapple-custom	INDEL	D1_5	map_l100_m2_e0	hetalt	0.0000	87.5000	0.0000	0.0000	42	6	0	0	0
cchapple-custom	INDEL	D6_15	func_cds	*	98.8235	97.6744	100.0000	47.5000	42	1	42	0	0
cchapple-custom	INDEL	I16_PLUS	HG002compoundhet	het	93.8692	89.3617	98.8556	50.9675	42	5	2505	29	26	89.6552
ckim-dragen	SNP	tv	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	80.8219	42	1	42	0	0

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