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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 997 998 999 1000 1001 1002 1003 1004 1005 ... 1720 1721 » 50001-50050 / 86044 show all
asubramanian-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	96.5517	95.4545	97.6744	89.1688	42	2	42	1	0	0.0000
asubramanian-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	96.5517	95.4545	97.6744	90.1376	42	2	42	1	0	0.0000
asubramanian-gatk	INDEL	I1_5	map_l250_m2_e1	homalt	95.4545	91.3043	100.0000	95.5789	42	4	42	0	0
asubramanian-gatk	INDEL	I6_15	map_l125_m1_e0	*	87.5000	79.2453	97.6744	93.5435	42	11	42	1	1	100.0000
asubramanian-gatk	INDEL	I6_15	map_l125_m2_e0	*	87.5000	79.2453	97.6744	94.2513	42	11	42	1	1	100.0000
asubramanian-gatk	INDEL	I6_15	map_l125_m2_e1	*	87.5000	79.2453	97.6744	94.4156	42	11	42	1	1	100.0000
astatham-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	92.3077	95.4545	89.3617	96.6284	42	2	42	5	0	0.0000
astatham-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	93.3333	91.3043	95.4545	68.1159	42	4	42	2	2	100.0000
astatham-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.5246	42	2	42	0	0
astatham-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.4207	42	2	42	0	0
astatham-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	38.5714	42	1	42	1	1	100.0000
astatham-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.6744	95.4545	100.0000	75.4386	42	2	42	0	0
bgallagher-sentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het	95.4545	95.4545	95.4545	96.8162	42	2	42	2	0	0.0000
gduggal-bwavard	INDEL	I16_PLUS	map_siren	het	68.1638	85.7143	56.5789	85.0099	42	7	43	33	20	60.6061
gduggal-bwavard	INDEL	I1_5	map_l250_m2_e0	homalt	94.3820	93.3333	95.4545	92.6789	42	3	42	2	1	50.0000
gduggal-bwafb	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	80.0693	68.8525	95.6522	51.5789	42	19	88	4	4	100.0000
gduggal-bwafb	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	79.3672	73.6842	86.0000	99.4308	42	15	43	7	4	57.1429
gduggal-bwafb	INDEL	D6_15	map_l125_m0_e0	*	92.4000	89.3617	95.6522	92.1098	42	5	44	2	1	50.0000
gduggal-bwafb	INDEL	I6_15	map_l100_m1_e0	het	83.1683	71.1864	100.0000	81.5094	42	17	49	0	0
gduggal-bwafb	SNP	*	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	77.6596	42	1	42	0	0
gduggal-bwavard	INDEL	*	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	0.4010	0.0000	0.0000	42	10433	0	0	0
gduggal-bwavard	INDEL	D16_PLUS	map_l100_m2_e0	het	61.8474	87.5000	47.8261	93.3765	42	6	44	48	20	41.6667
gduggal-bwavard	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	52.1569	63.6364	44.1860	82.8000	42	24	38	48	24	50.0000
gduggal-bwafb	SNP	tv	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	77.6596	42	1	42	0	0
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	94.3820	89.3617	100.0000	56.7010	42	5	42	0	0
gduggal-bwaplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	75.0000	60.8696	97.6744	74.5562	42	27	42	1	1	100.0000
eyeh-varpipe	SNP	*	map_l100_m2_e0	hetalt	99.6753	100.0000	99.3528	67.7116	42	0	307	2	1	50.0000
eyeh-varpipe	SNP	tv	map_l100_m2_e0	hetalt	99.3865	100.0000	98.7805	70.8703	42	0	162	2	1	50.0000
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	64.1221	47.1910	100.0000	79.8122	42	47	43	0	0
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	40.0000	25.0000	100.0000	89.1473	42	126	42	0	0
eyeh-varpipe	INDEL	D16_PLUS	HG002complexvar	hetalt	28.7793	17.0040	93.5897	61.3861	42	205	219	15	15	100.0000
eyeh-varpipe	INDEL	D16_PLUS	map_l100_m2_e0	*	58.4466	46.6667	78.1818	86.7150	42	48	43	12	12	100.0000
eyeh-varpipe	INDEL	I16_PLUS	HG002complexvar	hetalt	21.9016	12.5373	86.5385	70.1149	42	293	45	7	7	100.0000
eyeh-varpipe	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	80.3116	70.0000	94.1860	83.6812	42	18	81	5	4	80.0000
eyeh-varpipe	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	83.4783	85.7143	81.3559	70.4013	42	7	144	33	30	90.9091
eyeh-varpipe	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	68.3650	71.1864	65.7588	23.2836	42	17	338	176	176	100.0000
dgrover-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.7701	42	2	42	0	0
dgrover-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.6552	42	2	42	0	0
dgrover-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	38.5714	42	1	42	1	1	100.0000
dgrover-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	97.6744	95.4545	100.0000	75.7225	42	2	42	0	0
dgrover-gatk	SNP	*	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	73.2484	42	1	42	0	0
dgrover-gatk	SNP	tv	map_l100_m2_e1	hetalt	98.8235	97.6744	100.0000	73.2484	42	1	42	0	0
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	het	56.0000	84.0000	42.0000	67.7419	42	8	42	58	51	87.9310
ckim-vqsr	INDEL	D1_5	map_l100_m2_e1	hetalt	90.3226	82.3529	100.0000	91.7939	42	9	43	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	93.3805	89.3617	97.7778	82.0000	42	5	44	1	1	100.0000
ckim-vqsr	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.3401	42	3	42	0	0
ckim-vqsr	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	41.0959	42	1	42	1	1	100.0000
egarrison-hhga	INDEL	I6_15	func_cds	*	98.8235	97.6744	100.0000	36.3636	42	1	42	0	0
dgrover-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	93.3333	91.3043	95.4545	68.5714	42	4	42	2	2	100.0000
ckim-isaac	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	64.6154	48.8372	95.4545	66.4122	42	44	42	2	2	100.0000

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