PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
49151-49200 / 86044 show all
rpoplin-dv42INDEL*map_l250_m2_e0hetalt
92.3077
100.0000
85.7143
98.1333
60610
0.0000
rpoplin-dv42INDEL*map_l250_m2_e1hetalt
92.3077
100.0000
85.7143
98.1771
60610
0.0000
rpoplin-dv42INDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9996
10100
rpoplin-dv42INDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9953
10100
rpoplin-dv42INDEL*segdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*tech_badpromotershet
98.7342
100.0000
97.5000
49.3671
3903911
100.0000
rpoplin-dv42INDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
rpoplin-dv42INDELC16_PLUS**
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUS*het
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000